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The map label for this gene is pqqE [H]

Identifier: 15899070

GI number: 15899070

Start: 2112167

End: 2113201

Strand: Reverse

Name: pqqE [H]

Synonym: SSO2309

Alternate gene names: 15899070

Gene position: 2113201-2112167 (Counterclockwise)

Preceding gene: 15899074

Following gene: 15899069

Centisome position: 70.62

GC content: 35.75

Gene sequence:

>1035_bases
ATGTCAACTTTAAAACCTATGATATTTGGCAACGTGAAAAGGGCACTTCTGGGACTTGGAGTTAGAAAGTTACCTCTAAT
TGCGGGACATAAGTTGCTGTATACATGTAACTTAAGATGTAGAATGTGCCCCTTTTGGAGAAGAAAGGATGAAAAATTAC
TGTCTTTGGAAGAAGAGGTTTTGATGTTGAAGTCCTTAGAAAAAGCGGGAGTCCTCTTCATGGGATTTGAGGGTGGAGAA
CCGTTGCTGAGAAGAGATTTAGAGGATATATTGGAGGAATCTTATAAGAGATTTTATACTTCATTAGTGACAAATGGTTG
GTTACTCAAAGATAGGGCTAAAAGTATAAGCAATTATCTAGATTACCTATTCGTCTCGATAGATGGAATAGGGGAAGTTC
ATGATAAAATAAGAGGAATTTCGGGTGCATTTGAAAGGGCTGTGGAAGGTATAAAGGAGGCTAGGAAATATTTACCAGTA
GCAATCAGTTTTACAATAACTAAAGAAAACATGGATCAAGTTAAGGATGTAATAGAGCTTGCACGGAAACTTAATGTTAA
TATTAGTATACAAGTTGAGTATGACTATTCCACTGCAGAGAAATTAAGTCCAGATAAAAGGAGACTATATGACGCATTAA
GGCTAATTATTGAGCTTAAAAAGAGGGGTTATCAAATAATCGAGTCATCGGACTACTTTGAGGCAATAATTAAATCCTGG
TATAATGGAATACCATGGAGATGCAAACCTTGGTTAACGATAAATATCGACCCACAGGGTAGAATAGTACTTCCTTGTTA
TGTATTAAATGAATATAGTGGAACTGATAAAGTATGGGAGGTCGATATAGTAAAATTATGGAACAGTTATCCATGGGAAA
AATATGAGAGCTGTAATGCATGTGCTCTTGCTTGTTATCTAGAGCCTTCACTATTCAGTTGGTCGAATGGAAAAATGGTG
AAAGAGAAAATAATAGATAACATGGCGAGTTATGTTTACAACGCTAGCCCAATCAAATTTTTATTATCAAGATGA

Upstream 100 bases:

>100_bases
ATTGAAGTGAAGATAATAGCAGTTTGGTGTAAAAATGTCCTAGATCAATAAATCAGCTTTTAGCAAAAGATTAATACATG
CTTTTGTATATTAAATAATT

Downstream 100 bases:

>100_bases
ACATAATATATTATTAAAAAATGTTCTGCTACAAGTTGATATTAGTAGACGATAAATATTTCATGTATGTTTACGACGGA
GATAAGATAATTGGGTTAAT

Product: cofactor biosynthesis protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSTLKPMIFGNVKRALLGLGVRKLPLIAGHKLLYTCNLRCRMCPFWRRKDEKLLSLEEEVLMLKSLEKAGVLFMGFEGGE
PLLRRDLEDILEESYKRFYTSLVTNGWLLKDRAKSISNYLDYLFVSIDGIGEVHDKIRGISGAFERAVEGIKEARKYLPV
AISFTITKENMDQVKDVIELARKLNVNISIQVEYDYSTAEKLSPDKRRLYDALRLIIELKKRGYQIIESSDYFEAIIKSW
YNGIPWRCKPWLTINIDPQGRIVLPCYVLNEYSGTDKVWEVDIVKLWNSYPWEKYESCNACALACYLEPSLFSWSNGKMV
KEKIIDNMASYVYNASPIKFLLSR

Sequences:

>Translated_344_residues
MSTLKPMIFGNVKRALLGLGVRKLPLIAGHKLLYTCNLRCRMCPFWRRKDEKLLSLEEEVLMLKSLEKAGVLFMGFEGGE
PLLRRDLEDILEESYKRFYTSLVTNGWLLKDRAKSISNYLDYLFVSIDGIGEVHDKIRGISGAFERAVEGIKEARKYLPV
AISFTITKENMDQVKDVIELARKLNVNISIQVEYDYSTAEKLSPDKRRLYDALRLIIELKKRGYQIIESSDYFEAIIKSW
YNGIPWRCKPWLTINIDPQGRIVLPCYVLNEYSGTDKVWEVDIVKLWNSYPWEKYESCNACALACYLEPSLFSWSNGKMV
KEKIIDNMASYVYNASPIKFLLSR
>Mature_343_residues
STLKPMIFGNVKRALLGLGVRKLPLIAGHKLLYTCNLRCRMCPFWRRKDEKLLSLEEEVLMLKSLEKAGVLFMGFEGGEP
LLRRDLEDILEESYKRFYTSLVTNGWLLKDRAKSISNYLDYLFVSIDGIGEVHDKIRGISGAFERAVEGIKEARKYLPVA
ISFTITKENMDQVKDVIELARKLNVNISIQVEYDYSTAEKLSPDKRRLYDALRLIIELKKRGYQIIESSDYFEAIIKSWY
NGIPWRCKPWLTINIDPQGRIVLPCYVLNEYSGTDKVWEVDIVKLWNSYPWEKYESCNACALACYLEPSLFSWSNGKMVK
EKIIDNMASYVYNASPIKFLLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39900; Mature: 39769

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLKPMIFGNVKRALLGLGVRKLPLIAGHKLLYTCNLRCRMCPFWRRKDEKLLSLEEEV
CCCCCHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCEEECCHHHCCCHHHHHHHHHH
LMLKSLEKAGVLFMGFEGGEPLLRRDLEDILEESYKRFYTSLVTNGWLLKDRAKSISNYL
HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH
DYLFVSIDGIGEVHDKIRGISGAFERAVEGIKEARKYLPVAISFTITKENMDQVKDVIEL
HHHHHEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHH
ARKLNVNISIQVEYDYSTAEKLSPDKRRLYDALRLIIELKKRGYQIIESSDYFEAIIKSW
HHHCCCEEEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHH
YNGIPWRCKPWLTINIDPQGRIVLPCYVLNEYSGTDKVWEVDIVKLWNSYPWEKYESCNA
HCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEEHHHHHHCCCCCHHHCCCCC
CALACYLEPSLFSWSNGKMVKEKIIDNMASYVYNASPIKFLLSR
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure 
STLKPMIFGNVKRALLGLGVRKLPLIAGHKLLYTCNLRCRMCPFWRRKDEKLLSLEEEV
CCCCHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCEEECCHHHCCCHHHHHHHHHH
LMLKSLEKAGVLFMGFEGGEPLLRRDLEDILEESYKRFYTSLVTNGWLLKDRAKSISNYL
HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH
DYLFVSIDGIGEVHDKIRGISGAFERAVEGIKEARKYLPVAISFTITKENMDQVKDVIEL
HHHHHEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHH
ARKLNVNISIQVEYDYSTAEKLSPDKRRLYDALRLIIELKKRGYQIIESSDYFEAIIKSW
HHHCCCEEEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHH
YNGIPWRCKPWLTINIDPQGRIVLPCYVLNEYSGTDKVWEVDIVKLWNSYPWEKYESCNA
HCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEEHHHHHHCCCCCHHHCCCCC
CALACYLEPSLFSWSNGKMVKEKIIDNMASYVYNASPIKFLLSR
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA