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The map label for this gene is cbiD [H]

Identifier: 15899067

GI number: 15899067

Start: 2108586

End: 2109635

Strand: Reverse

Name: cbiD [H]

Synonym: SSO2305

Alternate gene names: 15899067

Gene position: 2109635-2108586 (Counterclockwise)

Preceding gene: 15899068

Following gene: 15899066

Centisome position: 70.5

GC content: 37.62

Gene sequence:

>1050_bases
ATGATAATAAACTCTTTGAAGAGATTTGGAATAACCACTGGAGCGGCAGCCTCTGCAGCCGCAAAGGCAGCAGTTATAGG
TCTACTTAATAAGGAGAAAAGAAGTACAGTAGTAATACCAACACCCATAGGATTGAGACTGGAAATTCCCGTGGAAAAAG
TTGAGATAGATAGTGAAATATCGTGCGCTGAGGTTAAGAAATTTTCCGGAGATAATCCGGATATATTAGATGGATTAGTA
ATAAGGTGCTGTGCTAAATTGAATGAGAATAATGAAATTGTAATAATTGGAGAAAGGGGAGTTGGTAAAGTTACTAGAAG
TGGGTTAAAAGCAACTATGGGTGAGATGGCAATAAGTCCTACTGTAAGAGAAATGATAATCAACGCAATAAGGGAAGTTA
CAGATAAGGGAATACAAATAACGATCGAAGTGCCAAATGGAGAGACCATTGCTGAAAAGACATTAAACAAAATGGTCGGA
ATAGTCGGTGGGATTTCCATACTCGGTACGACTGGTATTGAGACACCAGTTAGTGATGATGATTACTTAGAACACATTAG
ATGTGAGCTTAACGTAATTAGGCAGTCTTACGACTATGTAGTAATTGCGCCTGGGAATTCTGCTGCGAAGTATGCAGCAG
AGCTATTTGATAGTAACTGTATCATAAAAGTAGGAGATAGGATAGGGGATTCAATAAAGTTAGCGAGTAATCTTTTTAAG
AAGGTAATATTGGCTGGATTGCCTGCAAAGCTTCTTAAAGTGTATGCGGGGATTTTTAATACTCATTATTCACAAGGTGA
TGCTAGACTGGAATCGCTAACTCATGCCTCAGTTTTAGCAGGACTTCCTTACGGTACTCTAACTAAAATATCAAATGCTT
TGTCAGTTGAGGAAGCTTTTACGTATATGACAAAAGAACAAAGGAGAAAAGTTATGAACATTGTAGCGGAGAAAATATTG
AGTAGGATAAAAAGTTTTAATGACAATATAAACTTCTGCGTAATTATCTTCGATTATGACGGTGAGTCTTTGAGTAGGGT
GGGATGTTAA

Upstream 100 bases:

>100_bases
AAATAAGTATGAGTACTACAATGATAATAGGAAACTCATTGACATATAGATATAAAAATTACATGATAACACCAAGAGGT
TACGAGAGGAAATATGAGCT

Downstream 100 bases:

>100_bases
ATGGAATGGAATTACGTTATACCTGGAATTCCAGATAACCTCTTTGAAAGAGATGAAGAAATACCAATGACTAAAGAGGA
GATAAGGGCTTTGGCTTTAT

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MIINSLKRFGITTGAAASAAAKAAVIGLLNKEKRSTVVIPTPIGLRLEIPVEKVEIDSEISCAEVKKFSGDNPDILDGLV
IRCCAKLNENNEIVIIGERGVGKVTRSGLKATMGEMAISPTVREMIINAIREVTDKGIQITIEVPNGETIAEKTLNKMVG
IVGGISILGTTGIETPVSDDDYLEHIRCELNVIRQSYDYVVIAPGNSAAKYAAELFDSNCIIKVGDRIGDSIKLASNLFK
KVILAGLPAKLLKVYAGIFNTHYSQGDARLESLTHASVLAGLPYGTLTKISNALSVEEAFTYMTKEQRRKVMNIVAEKIL
SRIKSFNDNINFCVIIFDYDGESLSRVGC

Sequences:

>Translated_349_residues
MIINSLKRFGITTGAAASAAAKAAVIGLLNKEKRSTVVIPTPIGLRLEIPVEKVEIDSEISCAEVKKFSGDNPDILDGLV
IRCCAKLNENNEIVIIGERGVGKVTRSGLKATMGEMAISPTVREMIINAIREVTDKGIQITIEVPNGETIAEKTLNKMVG
IVGGISILGTTGIETPVSDDDYLEHIRCELNVIRQSYDYVVIAPGNSAAKYAAELFDSNCIIKVGDRIGDSIKLASNLFK
KVILAGLPAKLLKVYAGIFNTHYSQGDARLESLTHASVLAGLPYGTLTKISNALSVEEAFTYMTKEQRRKVMNIVAEKIL
SRIKSFNDNINFCVIIFDYDGESLSRVGC
>Mature_349_residues
MIINSLKRFGITTGAAASAAAKAAVIGLLNKEKRSTVVIPTPIGLRLEIPVEKVEIDSEISCAEVKKFSGDNPDILDGLV
IRCCAKLNENNEIVIIGERGVGKVTRSGLKATMGEMAISPTVREMIINAIREVTDKGIQITIEVPNGETIAEKTLNKMVG
IVGGISILGTTGIETPVSDDDYLEHIRCELNVIRQSYDYVVIAPGNSAAKYAAELFDSNCIIKVGDRIGDSIKLASNLFK
KVILAGLPAKLLKVYAGIFNTHYSQGDARLESLTHASVLAGLPYGTLTKISNALSVEEAFTYMTKEQRRKVMNIVAEKIL
SRIKSFNDNINFCVIIFDYDGESLSRVGC

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 37755; Mature: 37755

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINSLKRFGITTGAAASAAAKAAVIGLLNKEKRSTVVIPTPIGLRLEIPVEKVEIDSEI
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCHHHEECCCCC
SCAEVKKFSGDNPDILDGLVIRCCAKLNENNEIVIIGERGVGKVTRSGLKATMGEMAISP
CHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCH
TVREMIINAIREVTDKGIQITIEVPNGETIAEKTLNKMVGIVGGISILGTTGIETPVSDD
HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCH
DYLEHIRCELNVIRQSYDYVVIAPGNSAAKYAAELFDSNCIIKVGDRIGDSIKLASNLFK
HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
KVILAGLPAKLLKVYAGIFNTHYSQGDARLESLTHASVLAGLPYGTLTKISNALSVEEAF
HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TYMTKEQRRKVMNIVAEKILSRIKSFNDNINFCVIIFDYDGESLSRVGC
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCC
>Mature Secondary Structure
MIINSLKRFGITTGAAASAAAKAAVIGLLNKEKRSTVVIPTPIGLRLEIPVEKVEIDSEI
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCHHHEECCCCC
SCAEVKKFSGDNPDILDGLVIRCCAKLNENNEIVIIGERGVGKVTRSGLKATMGEMAISP
CHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCH
TVREMIINAIREVTDKGIQITIEVPNGETIAEKTLNKMVGIVGGISILGTTGIETPVSDD
HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCH
DYLEHIRCELNVIRQSYDYVVIAPGNSAAKYAAELFDSNCIIKVGDRIGDSIKLASNLFK
HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
KVILAGLPAKLLKVYAGIFNTHYSQGDARLESLTHASVLAGLPYGTLTKISNALSVEEAF
HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TYMTKEQRRKVMNIVAEKILSRIKSFNDNINFCVIIFDYDGESLSRVGC
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA