Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
---|---|
Accession | NC_002754 |
Length | 2,992,245 |
Click here to switch to the map view.
The map label for this gene is 15899024
Identifier: 15899024
GI number: 15899024
Start: 2067142
End: 2068644
Strand: Reverse
Name: 15899024
Synonym: SSO2251
Alternate gene names: NA
Gene position: 2068644-2067142 (Counterclockwise)
Preceding gene: 15899025
Following gene: 15899023
Centisome position: 69.13
GC content: 33.67
Gene sequence:
>1503_bases ATGATAATTGGTTATGTAATTGGTCAAGCTACAACACAAGAGGCTTTAATACTAGCTGAAAGGCCTGTTAGATTAGGAAC TTATGTTGTTCTAGAATATGATAACGTTAAGGCCCTTGGACTAATAACAAACGTGACTAGAGGTAGCCCTATGCTAGATG ATAATATGAATGATATAGAAATCGTTCAAAGATTAAAACAATTCAACAATAGCATACCCGTTTATACAAAGGCTAAAGTA AAAATGTTATGTGATATGAATAATCACTTTTTAATGCCCGATATACCCCCGTTCGCTGGAACCCCAGCTAGAGAGGCTGA AGATGAGGAGTTAAAAAGTATTTATTCTCAAGATGGCCAAATTAGAATAGGAAGCTTAATAGGTAAAAATGTGGAGGTTA AATTAAATATAAATTCCTTTGCAAGGCATTTAGCTATTTTAGCAGCTACTGGTTCTGGGAAGTCAAATACAGTAGCAGTT CTTTCTCAAAGAATTTCTGAACTTGGTGGATCTGTTCTTATATTCGATTATCATGGAGAGTACTATGATAGCGATATAAA GAATCTAAATCGTATTGAACCTAAACTTAACCCTCTTTATATGACCCCAAGGGAATTTTCTACGTTACTAGAAATAAGAG AGAATGCAATTATACAGTACAGAATTTTAAGAAGAGCTTTCATAAAGGTAACAAATGGTATAAGAGAAAAGCTAAAAGAA GGGCAAATACCATTTTCTACTCTAAATAGCCAATTTTACGAACTAATGAAAGACGAATTGGAAACTCAAGGAAATAGTGA TAAAAAGAGTAGTGCAAAGGATGAGGTACTGAATAAGTTTGAAGAATTTATGGATAGGTATTCAAACGTCATTGATCTTA CATCTTCAGATATAATTGAGAAAGTAAAGAGAGGTAAGGTAAACGTTGTAAGCCTAACACAATTAGATGAAGACTCAATG GATGCAGTAGTCTCACATTATTTAAGAAGAATCCTTGATTCTAGGAAAGATTTTAAAAGAAGCAAAAATAGTGGCCTTAA ATTCCCAATAATAGCTGTAATAGAAGAAGCTCACGTTTTCTTGTCTAAAAACGAGAATACATTAACCAAGTACTGGGCGT CCAGGATAGCAAGAGAGGGCAGAAAATTTGGAGTTGGATTAACAATAGTAAGCCAAAGGCCTAAAGGTTTGGACGAAAAT ATATTAAGTCAAATGACCAATAAGATCATTTTAAAGATAATTGAACCAACTGATAAAAAATACATCTTAGAGTCAAGTGA TAATTTAAGTGAAGATTTGGCTGAGCAATTGTCCTCCTTAGACGTTGGTGAGGCTATAATTATAGGTAAAATAGTAAAAT TACCTGCTGTTGTAAAGATAGATATGTTTGAAGGAAAATTACTTGGATCAGACCCTGACATGATAGGGGAATGGAAGAAA GTCGAGGAAAGTGAAAAAATAGCTAAAGGTTTTGCTGACTTTGGAACAGAAATTGGTGATTAA
Upstream 100 bases:
>100_bases CCTTGTAAAGCTATTTTTGCTTTTTAATTTTCCATTTCTAGGTATTACTCTTCTACGATGAGTAAGCCATTTTAGGAAGC CAGCAGTATTTTATCTATAC
Downstream 100 bases:
>100_bases AAATGGTACAAATTTTACATATTTCTGATACTCATTTAGGAAAAAGGCAGTACTCTCTAGTTGAAAGAGAGAAGGATATC TACGATATTTTCTCACAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPMLDDNMNDIEIVQRLKQFNNSIPVYTKAKV KMLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDGQIRIGSLIGKNVEVKLNINSFARHLAILAATGSGKSNTVAV LSQRISELGGSVLIFDYHGEYYDSDIKNLNRIEPKLNPLYMTPREFSTLLEIRENAIIQYRILRRAFIKVTNGIREKLKE GQIPFSTLNSQFYELMKDELETQGNSDKKSSAKDEVLNKFEEFMDRYSNVIDLTSSDIIEKVKRGKVNVVSLTQLDEDSM DAVVSHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHVFLSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDEN ILSQMTNKIILKIIEPTDKKYILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIGEWKK VEESEKIAKGFADFGTEIGD
Sequences:
>Translated_500_residues MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPMLDDNMNDIEIVQRLKQFNNSIPVYTKAKV KMLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDGQIRIGSLIGKNVEVKLNINSFARHLAILAATGSGKSNTVAV LSQRISELGGSVLIFDYHGEYYDSDIKNLNRIEPKLNPLYMTPREFSTLLEIRENAIIQYRILRRAFIKVTNGIREKLKE GQIPFSTLNSQFYELMKDELETQGNSDKKSSAKDEVLNKFEEFMDRYSNVIDLTSSDIIEKVKRGKVNVVSLTQLDEDSM DAVVSHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHVFLSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDEN ILSQMTNKIILKIIEPTDKKYILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIGEWKK VEESEKIAKGFADFGTEIGD >Mature_500_residues MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPMLDDNMNDIEIVQRLKQFNNSIPVYTKAKV KMLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDGQIRIGSLIGKNVEVKLNINSFARHLAILAATGSGKSNTVAV LSQRISELGGSVLIFDYHGEYYDSDIKNLNRIEPKLNPLYMTPREFSTLLEIRENAIIQYRILRRAFIKVTNGIREKLKE GQIPFSTLNSQFYELMKDELETQGNSDKKSSAKDEVLNKFEEFMDRYSNVIDLTSSDIIEKVKRGKVNVVSLTQLDEDSM DAVVSHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHVFLSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDEN ILSQMTNKIILKIIEPTDKKYILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIGEWKK VEESEKIAKGFADFGTEIGD
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1429 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 56329; Mature: 56329
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPMLDDNMNDIE CEEEEEECCCCCHHHHEEECCCCEECEEEEEEECCCEEEEEEHCCCCCCCCCCCCCCHHH IVQRLKQFNNSIPVYTKAKVKMLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDGQ HHHHHHHHCCCCCEEEHHHEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCC IRIGSLIGKNVEVKLNINSFARHLAILAATGSGKSNTVAVLSQRISELGGSVLIFDYHGE EEEHHCCCCCEEEEEEHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCC YYDSDIKNLNRIEPKLNPLYMTPREFSTLLEIRENAIIQYRILRRAFIKVTNGIREKLKE HHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQIPFSTLNSQFYELMKDELETQGNSDKKSSAKDEVLNKFEEFMDRYSNVIDLTSSDIIE CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KVKRGKVNVVSLTQLDEDSMDAVVSHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHVF HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHE LSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDENILSQMTNKIILKIIEPTDKK EECCCCHHHHHHHHHHHHCCHHCCCEEEEECCCCCCCCHHHHHHHHHHHEEEEECCCCCE YILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIGEWKK EEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCEECCCCCHHHHHHHH VEESEKIAKGFADFGTEIGD HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPMLDDNMNDIE CEEEEEECCCCCHHHHEEECCCCEECEEEEEEECCCEEEEEEHCCCCCCCCCCCCCCHHH IVQRLKQFNNSIPVYTKAKVKMLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDGQ HHHHHHHHCCCCCEEEHHHEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCC IRIGSLIGKNVEVKLNINSFARHLAILAATGSGKSNTVAVLSQRISELGGSVLIFDYHGE EEEHHCCCCCEEEEEEHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCC YYDSDIKNLNRIEPKLNPLYMTPREFSTLLEIRENAIIQYRILRRAFIKVTNGIREKLKE HHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQIPFSTLNSQFYELMKDELETQGNSDKKSSAKDEVLNKFEEFMDRYSNVIDLTSSDIIE CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KVKRGKVNVVSLTQLDEDSMDAVVSHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHVF HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHE LSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDENILSQMTNKIILKIIEPTDKK EECCCCHHHHHHHHHHHHCCHHCCCEEEEECCCCCCCCHHHHHHHHHHHEEEEECCCCCE YILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIGEWKK EEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCEECCCCCHHHHHHHH VEESEKIAKGFADFGTEIGD HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]