Click here to switch to the map view.

The map label for this gene is ycfF [C]

Identifier: 15898944

GI number: 15898944

Start: 1989946

End: 1990365

Strand: Reverse

Name: ycfF [C]

Synonym: SSO2163

Alternate gene names: 15898944

Gene position: 1990365-1989946 (Counterclockwise)

Preceding gene: 15898945

Following gene: 15898943

Centisome position: 66.52

GC content: 33.57

Gene sequence:

>420_bases
ATGTGTATCTTTTGCAACATTGTTGAAGGAAGGGATCATGGGTATATCGTGTATAGTAACGATAGAGTAGTCGCATTTCT
GGATAAATTTCCTATTACACCTGGACATACTTTGGTAGTACCTAGAACACATTATGAGAATTTTTTAGAGATTTCTGAAG
ACGTCATACCATATTTATGTACAGCTGTAAGAAAGATTTCAATTGCAGTAAAGAAAGCTTTGAAGGCTGATGGTATAAGA
ATATTAACCAATATTGGAAAGAGTGCAGGGCAAGTGGTATTTCACTCTCATTTTCATATAGTTCCAACATGGTCCCAAGA
TCCAGATATAATGAAAGATTTCGTACCAAGAAAAGAACAGTCAAGGGAATATTACGAGTACGTACAAAAAGCAATAATAG
AAACTTTAAAGAATATATAA

Upstream 100 bases:

>100_bases
ATTAAAAATGGAATCTTCATGAATGAAGAAATCCAGTTGAATAGCAAAGGGATTTTTTGTAACTAAACTTATAATTTTGT
AGTAATGAGGGTCAATACAG

Downstream 100 bases:

>100_bases
ATGCTAGAATAATATATAACATTTAAGGGTAGTAATATGGGTTTGGAAGAGGAGTTGAAAAGTTTACTAGGGGATAGTTT
TCATGATGAATTAGTAGAGA

Product: histidine triad (Hit) family protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MCIFCNIVEGRDHGYIVYSNDRVVAFLDKFPITPGHTLVVPRTHYENFLEISEDVIPYLCTAVRKISIAVKKALKADGIR
ILTNIGKSAGQVVFHSHFHIVPTWSQDPDIMKDFVPRKEQSREYYEYVQKAIIETLKNI

Sequences:

>Translated_139_residues
MCIFCNIVEGRDHGYIVYSNDRVVAFLDKFPITPGHTLVVPRTHYENFLEISEDVIPYLCTAVRKISIAVKKALKADGIR
ILTNIGKSAGQVVFHSHFHIVPTWSQDPDIMKDFVPRKEQSREYYEYVQKAIIETLKNI
>Mature_139_residues
MCIFCNIVEGRDHGYIVYSNDRVVAFLDKFPITPGHTLVVPRTHYENFLEISEDVIPYLCTAVRKISIAVKKALKADGIR
ILTNIGKSAGQVVFHSHFHIVPTWSQDPDIMKDFVPRKEQSREYYEYVQKAIIETLKNI

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain

Homologues:

Organism=Saccharomyces cerevisiae, GI6320078, Length=101, Percent_Identity=33.6633663366337, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHIT_SULSO (P95937)

Other databases:

- EMBL:   Y08256
- EMBL:   AE006641
- PIR:   S74070
- RefSeq:   NP_343549.1
- ProteinModelPortal:   P95937
- SMR:   P95937
- GeneID:   1453666
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO2163
- NMPDR:   fig|273057.1.peg.1972
- HOGENOM:   HBG743217
- OMA:   PARGILD
- PhylomeDB:   P95937
- ProtClustDB:   CLSK803228
- BioCyc:   SSOL273057:SSO2163-MONOMER
- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310
- Gene3D:   G3DSA:3.30.428.10
- PANTHER:   PTHR23089
- PRINTS:   PR00332

Pfam domain/function: PF01230 HIT; SSF54197 His_triad-like_motif

EC number: NA

Molecular weight: Translated: 16011; Mature: 16011

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00892 HIT_1; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIFCNIVEGRDHGYIVYSNDRVVAFLDKFPITPGHTLVVPRTHYENFLEISEDVIPYLC
CEEEEEEECCCCCCEEEEECCEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHH
TAVRKISIAVKKALKADGIRILTNIGKSAGQVVFHSHFHIVPTWSQDPDIMKDFVPRKEQ
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCEEEEECCCCCHHHHHHHCCCCCC
SREYYEYVQKAIIETLKNI
CHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCIFCNIVEGRDHGYIVYSNDRVVAFLDKFPITPGHTLVVPRTHYENFLEISEDVIPYLC
CEEEEEEECCCCCCEEEEECCEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHH
TAVRKISIAVKKALKADGIRILTNIGKSAGQVVFHSHFHIVPTWSQDPDIMKDFVPRKEQ
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCEEEEECCCCCHHHHHHHCCCCCC
SREYYEYVQKAIIETLKNI
CHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726