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The map label for this gene is ybhR [C]

Identifier: 15898919

GI number: 15898919

Start: 1964022

End: 1964894

Strand: Reverse

Name: ybhR [C]

Synonym: SSO2135

Alternate gene names: 15898919

Gene position: 1964894-1964022 (Counterclockwise)

Preceding gene: 15898920

Following gene: 15898918

Centisome position: 65.67

GC content: 37.46

Gene sequence:

>873_bases
ATGATAGAGGAAGAAAGAAATAACTATTCTGTTTTCCACGGTTTGTGGACTTTAGCATCTAGGGAACTGAAGAAGTGGTA
TAAGGCACCCGTAATACTCCTCCTTTCATTAATACAGCCAATATTCTGGATAGGAATATTCGGTAAGGCAATGAATTTAG
GCAGTATCTTCACAGAAACCACCTTTAATATACCTGGTTTAACAATACCAAAGCAAGTATTAGACCAAATAGGTTTAGAG
ATACTTAAACAGACCTTCGGAACTACTGATTACTTCTCCTTCCTAGCTGCAGGGATGCTATCTTTCATAGTGTTATTTAC
ATCAATGCAGAGTGGTATGTCAATAGTTTGGGATAGAAGATTAGGAGTACTTGATAGAATTCTAACTACCCCAGTTCCTA
GAGGAAACATAATAATAGGTAAGGTACTTTCTGCGGTAATAAGATCATTAGTGCAAGCTACAATTGTCCTTGTAGTTGCA
GTACTGCTCGGAATGACTTTTGCACCAGAAATTAACCCTCTTGACTTCCTAGGAGTCTACGCTGCATTGTTCCTAATGTC
CTTCGGCTTATCTTCATTATTTCTAATGCTAGCTCTGAGAGCTACTAGTTGGGAATCACAAATGGCTATAATGAATTTAC
TAAACCTACCATTACTCTTTACCAGCAACGCATTCTATCCAGTAAAATCAATGCCGTATTGGTTAAAGCCAGTAGCCTAC
ATTAATCCATTAACGTATTCTAATGGGGTTGCGAGAGGGATGTTACTGGGAATAAGTACTAATCTTGCTATAGACTTTCT
CTATCTAGGATTATTTGCCATAATATTATCTACAATAGGTATAGTACTGTCTTGGAAATACCTCTCGAAGTAA

Upstream 100 bases:

>100_bases
ATGAAGTGTACATGGAGTTTACTGGAAAGAGCCTAAGAGATGAAGAGGCAAGTGCTCAAGAAATGTTTGCGTTTAGAAGA
ACTATGAGGAGGGCCAGAAC

Downstream 100 bases:

>100_bases
AATCTTTTTCTCATAGAAACACTTTTATTTTATAAAATAACGAAATAATATTAATGAGCTACTTCGACAACATACCGCTA
TCAGTAAGAATTAGGACATT

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Multidrug ABC Transporter Permease Protein; ABC Transporter; ABC-Type Multidrug Transport System Permease Component; ABC Transporter Permease; ABC-Type Drug Export System Membrane Protein; Multidrug ABC Transporter Permease; ABC-2 Type Transporter Superfamily; Daunorubicin Resistance Membrane Protein; Daunorubicin Resistance ABC Transporter Membrane Protein; Multidrug ABC Transporter Permease Component; Abc-2 Type Transporter; ABC Transporter Permease Component; Antibiotic ABC Transporter Transmembrane Protein; Abc-2 Type Transporter Integral Membrane Subunit; ABC-Type Multidrug Transport System Permease Protein; ABC Efflux Pump Inner Membrane Subunit; Drug ABC Transporter Membrane Protein; ABC Multidrug Efflux Pump Inner Membrane Subunit; ABC-2 Transporter Component; ABC Multidrug Transporter Permease Component; Daunorubicin Resistance Transmembrane Protein; ABC Type Transporter Permease Component; Antibiotic Export Permease Protein; Daunorubicin Resistance ABC Transporter Permease; ABC-Type Drug Export System; ABC-Type Multidrug Transport System; Transporter ABC-2 Integral Membrane Protein Family; ABC-Type Multidrug Transport System Permease; Antibiotic Resistance ABC Transporter Permease Protein; ABC Transporter Protein

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MIEEERNNYSVFHGLWTLASRELKKWYKAPVILLLSLIQPIFWIGIFGKAMNLGSIFTETTFNIPGLTIPKQVLDQIGLE
ILKQTFGTTDYFSFLAAGMLSFIVLFTSMQSGMSIVWDRRLGVLDRILTTPVPRGNIIIGKVLSAVIRSLVQATIVLVVA
VLLGMTFAPEINPLDFLGVYAALFLMSFGLSSLFLMLALRATSWESQMAIMNLLNLPLLFTSNAFYPVKSMPYWLKPVAY
INPLTYSNGVARGMLLGISTNLAIDFLYLGLFAIILSTIGIVLSWKYLSK

Sequences:

>Translated_290_residues
MIEEERNNYSVFHGLWTLASRELKKWYKAPVILLLSLIQPIFWIGIFGKAMNLGSIFTETTFNIPGLTIPKQVLDQIGLE
ILKQTFGTTDYFSFLAAGMLSFIVLFTSMQSGMSIVWDRRLGVLDRILTTPVPRGNIIIGKVLSAVIRSLVQATIVLVVA
VLLGMTFAPEINPLDFLGVYAALFLMSFGLSSLFLMLALRATSWESQMAIMNLLNLPLLFTSNAFYPVKSMPYWLKPVAY
INPLTYSNGVARGMLLGISTNLAIDFLYLGLFAIILSTIGIVLSWKYLSK
>Mature_290_residues
MIEEERNNYSVFHGLWTLASRELKKWYKAPVILLLSLIQPIFWIGIFGKAMNLGSIFTETTFNIPGLTIPKQVLDQIGLE
ILKQTFGTTDYFSFLAAGMLSFIVLFTSMQSGMSIVWDRRLGVLDRILTTPVPRGNIIIGKVLSAVIRSLVQATIVLVVA
VLLGMTFAPEINPLDFLGVYAALFLMSFGLSSLFLMLALRATSWESQMAIMNLLNLPLLFTSNAFYPVKSMPYWLKPVAY
INPLTYSNGVARGMLLGISTNLAIDFLYLGLFAIILSTIGIVLSWKYLSK

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787010, Length=191, Percent_Identity=26.7015706806283, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32327; Mature: 32327

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA