Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
---|---|
Accession | NC_002754 |
Length | 2,992,245 |
Click here to switch to the map view.
The map label for this gene is yhcG [H]
Identifier: 15898900
GI number: 15898900
Start: 1940056
End: 1940829
Strand: Reverse
Name: yhcG [H]
Synonym: SSO2116
Alternate gene names: 15898900
Gene position: 1940829-1940056 (Counterclockwise)
Preceding gene: 15898902
Following gene: 15898899
Centisome position: 64.86
GC content: 35.01
Gene sequence:
>774_bases ATGCTAGAATATAGAGATTTCACGGTAAAGTTTGAGAGCGTAGTATTCCAAGGGATTAATATGACTATTAATAGAAAGGG AATTGTATTAGGACCCAATGGTTCAGGGAAAACTACTATCATAAAGGCTACATGCGGATTAATGCCTTACAAAGGCTACA TTTACGTTAATGGAATGGAAGTGAGAAAAATAAGGAATTATTTAGGTCTCTCCACTAACCTAGTAGAAGTTTATAGCATA GGTAGAAAGGTTAAAGATATTGTATATATATTTGAAGAGATAAAGAATTTAGACGGTGATATGTTTAGGAGATTGCTGGA GGAGGCTAGACTTTTCGATCAAGTCATAAACAAACCTTTATACAAGCTTTCAGCTGGTCAATCGTCGATAGTGAGACTAG CTTTAGCATTATCTACAAATCCAAAGGTTGCATTAATAGATGAGCCATTTGAAAATCTAGATCCCGCGAGAAGGCTAATC ATAGCAAGATGGTTAAAGGAGTATTTCGAAGAAGGTTTTGTGACTACGCATGAGTTAGATCTACTAAAGGAATTTAAGGA TTGGGACTCTTATATATTGATAAATGGAAAAATTTATGGTCCTATACCGGTTACAGACCTTATTGAAGCTAGTGTAGTAG AGGGTGATGTGGAAAACTCTATACTTACCATAGAGATTCAAGAAGGAAAGACGTTATCATTTGTTAAAAATGCTCAAATT GGGGCTAGATTGACCAATTTAGGTAGCATAGATCGAATTTATGGTGTAATGTAA
Upstream 100 bases:
>100_bases ATGACTTCTAATTAGTAAAGAAGATACTATAAATTCAAATGATAGTTCAATTTCTGAACTACCTTGAGGACTTTTAATAT CCAGATGTAAAAATAGAATA
Downstream 100 bases:
>100_bases ATGAGTTACAAGGACTTAATCAAAGACGCTAATGACTTTGCTAGAGTCTTAATTAAGAGGAAGTCTAGAAAGGTACTAGG TATATATTACGCGGTTTGGG
Product: cobalt transport ATP-binding protein (cbiO-2) homolog, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MLEYRDFTVKFESVVFQGINMTINRKGIVLGPNGSGKTTIIKATCGLMPYKGYIYVNGMEVRKIRNYLGLSTNLVEVYSI GRKVKDIVYIFEEIKNLDGDMFRRLLEEARLFDQVINKPLYKLSAGQSSIVRLALALSTNPKVALIDEPFENLDPARRLI IARWLKEYFEEGFVTTHELDLLKEFKDWDSYILINGKIYGPIPVTDLIEASVVEGDVENSILTIEIQEGKTLSFVKNAQI GARLTNLGSIDRIYGVM
Sequences:
>Translated_257_residues MLEYRDFTVKFESVVFQGINMTINRKGIVLGPNGSGKTTIIKATCGLMPYKGYIYVNGMEVRKIRNYLGLSTNLVEVYSI GRKVKDIVYIFEEIKNLDGDMFRRLLEEARLFDQVINKPLYKLSAGQSSIVRLALALSTNPKVALIDEPFENLDPARRLI IARWLKEYFEEGFVTTHELDLLKEFKDWDSYILINGKIYGPIPVTDLIEASVVEGDVENSILTIEIQEGKTLSFVKNAQI GARLTNLGSIDRIYGVM >Mature_257_residues MLEYRDFTVKFESVVFQGINMTINRKGIVLGPNGSGKTTIIKATCGLMPYKGYIYVNGMEVRKIRNYLGLSTNLVEVYSI GRKVKDIVYIFEEIKNLDGDMFRRLLEEARLFDQVINKPLYKLSAGQSSIVRLALALSTNPKVALIDEPFENLDPARRLI IARWLKEYFEEGFVTTHELDLLKEFKDWDSYILINGKIYGPIPVTDLIEASVVEGDVENSILTIEIQEGKTLSFVKNAQI GARLTNLGSIDRIYGVM
Specific function: Not Known. Is Coded In An Operon Essential For Cell Division. [C]
COG id: COG1121
COG function: function code P; ABC-type Mn/Zn transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1789873, Length=220, Percent_Identity=27.7272727272727, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787029, Length=210, Percent_Identity=27.6190476190476, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1786975, Length=175, Percent_Identity=24.5714285714286, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI87081782, Length=195, Percent_Identity=28.2051282051282, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 29158; Mature: 29158
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEYRDFTVKFESVVFQGINMTINRKGIVLGPNGSGKTTIIKATCGLMPYKGYIYVNGME CCCCCCCEEEEHHHHHCCCCEEEECCEEEECCCCCCCEEEEEEECCCCCCCCEEEECCHH VRKIRNYLGLSTNLVEVYSIGRKVKDIVYIFEEIKNLDGDMFRRLLEEARLFDQVINKPL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC YKLSAGQSSIVRLALALSTNPKVALIDEPFENLDPARRLIIARWLKEYFEEGFVTTHELD EEECCCCHHHEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH LLKEFKDWDSYILINGKIYGPIPVTDLIEASVVEGDVENSILTIEIQEGKTLSFVKNAQI HHHHHCCCCCEEEECCEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCH GARLTNLGSIDRIYGVM HHHHHCCCCHHHHHCCC >Mature Secondary Structure MLEYRDFTVKFESVVFQGINMTINRKGIVLGPNGSGKTTIIKATCGLMPYKGYIYVNGME CCCCCCCEEEEHHHHHCCCCEEEECCEEEECCCCCCCEEEEEEECCCCCCCCEEEECCHH VRKIRNYLGLSTNLVEVYSIGRKVKDIVYIFEEIKNLDGDMFRRLLEEARLFDQVINKPL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC YKLSAGQSSIVRLALALSTNPKVALIDEPFENLDPARRLIIARWLKEYFEEGFVTTHELD EEECCCCHHHEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH LLKEFKDWDSYILINGKIYGPIPVTDLIEASVVEGDVENSILTIEIQEGKTLSFVKNAQI HHHHHCCCCCEEEECCEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCH GARLTNLGSIDRIYGVM HHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]