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The map label for this gene is 15898758

Identifier: 15898758

GI number: 15898758

Start: 1777542

End: 1778315

Strand: Reverse

Name: 15898758

Synonym: SSO1962

Alternate gene names: NA

Gene position: 1778315-1777542 (Counterclockwise)

Preceding gene: 15898759

Following gene: 15898754

Centisome position: 59.43

GC content: 39.15

Gene sequence:

>774_bases
GTGATAAGCTTTATTTTAGTAGCACCTCATGGAGATGAGATAATTGATCCAAAAGATGAAAAATCATCGTTGTTAAATAA
GGCAATGAGGGAAGCTGCAAGTTTAGTTAAGGCTGATAAGTACATCGTAATTACTCCCCATAATATAAGAATTGACGATC
ACATGGCGGTAATATTAACGCAATACGCTGAAGGAAAGCGGGGTAAAATCAAGAGAAAGTACCTTTGTGATAGGGGATTG
GCTTACGAAATATATGAAAGGGCAAAAGGGAGTGGCCTACCGGTGGTTGGTGTTAATTTCGGGGCTTTAGAAGGAAAGGA
GTCAAAGATCGCGCTAGATTGGGGGTCATCGATTCCTCTTTACTTCTTGAAAAGGAGGAGAATTGTATTGTTGACTCCAG
CTAGGGGAGTTAAAAGGGAGATATTGAGGAAGTTTGGAGTAGTAATTGGTGAAGTTTTAAGAGATCATAGAAAAAGGGTT
GGAGTAATAGTTAGTGCGGATCACGCTCATACCCACGATCCTAAGGGACCTTATGGTTATTCAGAATACGCTGCGGTTTA
CGATTCCACTATTGTAGATATTTTTAAGAGCGAAAGATTTGAGGATTTGATGAAGATTGATGATAAAGTTATTAGTGAGG
CGAAGCCCGATAGCTATTGGCAATTGCTCATAATGCTCGGAATTCTTGAGAGTAGTTATAATAAGTATAGCGTTAAGTTG
ATGGAATATCAAGTCCCAAGTTATTTTGGGATGATGGTTGCTCTACTCAGTTAA

Upstream 100 bases:

>100_bases
TTTATAAACTTACCATATTATACTACAGTAAGTTAACGAGATCTTGTTGAAATGCGATACACAGTACAAAACTTAAAGTT
TGAAATAGCAAGAGTTAAAT

Downstream 100 bases:

>100_bases
TTCTTTATGGTTATATAAAAAACTAAATTATAGAAATATTTCTAACAAAATAGAAAATCTTTCCAAATTATAAAATTATT
TTTAATAAAATAAAAGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MISFILVAPHGDEIIDPKDEKSSLLNKAMREAASLVKADKYIVITPHNIRIDDHMAVILTQYAEGKRGKIKRKYLCDRGL
AYEIYERAKGSGLPVVGVNFGALEGKESKIALDWGSSIPLYFLKRRRIVLLTPARGVKREILRKFGVVIGEVLRDHRKRV
GVIVSADHAHTHDPKGPYGYSEYAAVYDSTIVDIFKSERFEDLMKIDDKVISEAKPDSYWQLLIMLGILESSYNKYSVKL
MEYQVPSYFGMMVALLS

Sequences:

>Translated_257_residues
MISFILVAPHGDEIIDPKDEKSSLLNKAMREAASLVKADKYIVITPHNIRIDDHMAVILTQYAEGKRGKIKRKYLCDRGL
AYEIYERAKGSGLPVVGVNFGALEGKESKIALDWGSSIPLYFLKRRRIVLLTPARGVKREILRKFGVVIGEVLRDHRKRV
GVIVSADHAHTHDPKGPYGYSEYAAVYDSTIVDIFKSERFEDLMKIDDKVISEAKPDSYWQLLIMLGILESSYNKYSVKL
MEYQVPSYFGMMVALLS
>Mature_257_residues
MISFILVAPHGDEIIDPKDEKSSLLNKAMREAASLVKADKYIVITPHNIRIDDHMAVILTQYAEGKRGKIKRKYLCDRGL
AYEIYERAKGSGLPVVGVNFGALEGKESKIALDWGSSIPLYFLKRRRIVLLTPARGVKREILRKFGVVIGEVLRDHRKRV
GVIVSADHAHTHDPKGPYGYSEYAAVYDSTIVDIFKSERFEDLMKIDDKVISEAKPDSYWQLLIMLGILESSYNKYSVKL
MEYQVPSYFGMMVALLS

Specific function: Unknown

COG id: COG3885

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733
- InterPro:   IPR004183 [H]

Pfam domain/function: PF01871 AMMECR1; PF02900 LigB [H]

EC number: NA

Molecular weight: Translated: 29129; Mature: 29129

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFILVAPHGDEIIDPKDEKSSLLNKAMREAASLVKADKYIVITPHNIRIDDHMAVILT
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCHHEEEEE
QYAEGKRGKIKRKYLCDRGLAYEIYERAKGSGLPVVGVNFGALEGKESKIALDWGSSIPL
HHCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCH
YFLKRRRIVLLTPARGVKREILRKFGVVIGEVLRDHRKRVGVIVSADHAHTHDPKGPYGY
HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC
SEYAAVYDSTIVDIFKSERFEDLMKIDDKVISEAKPDSYWQLLIMLGILESSYNKYSVKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEE
MEYQVPSYFGMMVALLS
EEEECCHHHHHHHHHCC
>Mature Secondary Structure
MISFILVAPHGDEIIDPKDEKSSLLNKAMREAASLVKADKYIVITPHNIRIDDHMAVILT
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCHHEEEEE
QYAEGKRGKIKRKYLCDRGLAYEIYERAKGSGLPVVGVNFGALEGKESKIALDWGSSIPL
HHCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCH
YFLKRRRIVLLTPARGVKREILRKFGVVIGEVLRDHRKRVGVIVSADHAHTHDPKGPYGY
HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC
SEYAAVYDSTIVDIFKSERFEDLMKIDDKVISEAKPDSYWQLLIMLGILESSYNKYSVKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEE
MEYQVPSYFGMMVALLS
EEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]