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The map label for this gene is 15898630

Identifier: 15898630

GI number: 15898630

Start: 1658048

End: 1659307

Strand: Reverse

Name: 15898630

Synonym: SSO1829

Alternate gene names: NA

Gene position: 1659307-1658048 (Counterclockwise)

Preceding gene: 15898631

Following gene: 15898629

Centisome position: 55.45

GC content: 43.25

Gene sequence:

>1260_bases
GTGTTGAAGAACTTAAGAATTAGAAAATTTGAACCGGAAGAGGAATACGTGTACTTCACGTACTCCATCAAGAATAGTGA
GAGGGAGAAGAGCAAAGAATTAATTAAAGAATACAGAACACTACTACAGAAAGCAATTGACCACCTGTGGAATTTAACAA
AAATACAAGTAAGAAAGAACGGTAATTACAAGATAACACTACCGAAGAAGAAGGAAGTGTACAAACCACTTAGGGAAGAG
TTGGAGAAGATCAATCACCTCGCGTCACACTACGTCGATAAGGCAATTAATGACGCATTCTCGATCCTCACATCGTGGAG
GAAAAGGGCTATAAAGGGGAGAGCTTCGATTGAAAAACCAAGGGTGAAGAAGGCTTACGTTAGGATAAAGACGACTTTGA
GGAAGGTTGTGGGGGAAAGCGTTAGAATAACTGTAAGACCTTATGAGTACATCACCTTCTCGTGGAGTAAGTCATGGTTC
TCAAGAAGGGTTAGGGAGTTGGAACTCGGCGAACCTATAATTAAGGAGGAGAAAGTGTATTTGCCATTTCGTTACAAGTT
ACCGTGGGTAACACCATTAAACTTTCTGGCCATTGACTCCAACCTTTATACTCTAGATGCTTATGATGGTGAGAAATTCG
TTACAATCTCACTAAAGCAGTTGTACTCCCTTAAGTACTCCATGGAGGTGAAGAGGGCTAAGGTGCAATCATTTGCATCT
AAGCACACGAAGAGGGGGAGAGAGTTGATGAGGAAGTATTCGCATAGGGAGAGGAATCGCGTTCTTGACTTCGTTCACAA
GTTTGTTAACACTTTGTTGGACCTGTACCCCATGACGTTTTTCGCTGTGGAAAAGCTTAACAAAGAGAGTATGTTTAAGG
ATGCTAATGACTCTCTTTCGAGGAAGATTTCTAGGACTGTTTGGAGGAGTATACACAGAGTGTTGAAGTACAAGGCTCCG
CTTTACGGTTCTTTCGTTAAGGAAGTGAACCCGTACCTCACCTCGAGGTCTTGCCCCAGATGTAGGTTTGTATCCCGAAA
GGTTGGTAAGACCTTTGAGTGTGAGAGGTGTGGGTTCAAGTTGGATAGGCAATTGAACGCTTCACTGAATATTTATCTCA
AGATGTGCGGTTTTCCTCACATCCGTTCACGGGTGTGGGTTGGGGTTATTCCGCTAATGGGGCGGAGAGGGATGAACGTC
CGCGACTTCGGTGAAGCCCAAGGGCTGAGGGTTGATATTAAATATCATGAAATCCTATGA

Upstream 100 bases:

>100_bases
AAAGAAGAAGAATTGGTCGAAGACTTAGTCTCAATACTAGTCTCATTCAGTGGGAAACTCTATGGCATGAGGAGTCATAA
ATACGAGAAGGTGAAGAAAT

Downstream 100 bases:

>100_bases
AGCCCAAACCCCTTATACACTAGGTATTAACACTTCGTGATAATATCCGCTTATTTTAGGAAAAACTTGTTGCTTCCTTT
TTTAGTGAAGTATGAGAAAA

Product: second ORF in transposon ISC1778

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MLKNLRIRKFEPEEEYVYFTYSIKNSEREKSKELIKEYRTLLQKAIDHLWNLTKIQVRKNGNYKITLPKKKEVYKPLREE
LEKINHLASHYVDKAINDAFSILTSWRKRAIKGRASIEKPRVKKAYVRIKTTLRKVVGESVRITVRPYEYITFSWSKSWF
SRRVRELELGEPIIKEEKVYLPFRYKLPWVTPLNFLAIDSNLYTLDAYDGEKFVTISLKQLYSLKYSMEVKRAKVQSFAS
KHTKRGRELMRKYSHRERNRVLDFVHKFVNTLLDLYPMTFFAVEKLNKESMFKDANDSLSRKISRTVWRSIHRVLKYKAP
LYGSFVKEVNPYLTSRSCPRCRFVSRKVGKTFECERCGFKLDRQLNASLNIYLKMCGFPHIRSRVWVGVIPLMGRRGMNV
RDFGEAQGLRVDIKYHEIL

Sequences:

>Translated_419_residues
MLKNLRIRKFEPEEEYVYFTYSIKNSEREKSKELIKEYRTLLQKAIDHLWNLTKIQVRKNGNYKITLPKKKEVYKPLREE
LEKINHLASHYVDKAINDAFSILTSWRKRAIKGRASIEKPRVKKAYVRIKTTLRKVVGESVRITVRPYEYITFSWSKSWF
SRRVRELELGEPIIKEEKVYLPFRYKLPWVTPLNFLAIDSNLYTLDAYDGEKFVTISLKQLYSLKYSMEVKRAKVQSFAS
KHTKRGRELMRKYSHRERNRVLDFVHKFVNTLLDLYPMTFFAVEKLNKESMFKDANDSLSRKISRTVWRSIHRVLKYKAP
LYGSFVKEVNPYLTSRSCPRCRFVSRKVGKTFECERCGFKLDRQLNASLNIYLKMCGFPHIRSRVWVGVIPLMGRRGMNV
RDFGEAQGLRVDIKYHEIL
>Mature_419_residues
MLKNLRIRKFEPEEEYVYFTYSIKNSEREKSKELIKEYRTLLQKAIDHLWNLTKIQVRKNGNYKITLPKKKEVYKPLREE
LEKINHLASHYVDKAINDAFSILTSWRKRAIKGRASIEKPRVKKAYVRIKTTLRKVVGESVRITVRPYEYITFSWSKSWF
SRRVRELELGEPIIKEEKVYLPFRYKLPWVTPLNFLAIDSNLYTLDAYDGEKFVTISLKQLYSLKYSMEVKRAKVQSFAS
KHTKRGRELMRKYSHRERNRVLDFVHKFVNTLLDLYPMTFFAVEKLNKESMFKDANDSLSRKISRTVWRSIHRVLKYKAP
LYGSFVKEVNPYLTSRSCPRCRFVSRKVGKTFECERCGFKLDRQLNASLNIYLKMCGFPHIRSRVWVGVIPLMGRRGMNV
RDFGEAQGLRVDIKYHEIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095 [H]

Pfam domain/function: PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 50005; Mature: 50005

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNLRIRKFEPEEEYVYFTYSIKNSEREKSKELIKEYRTLLQKAIDHLWNLTKIQVRKN
CCCCCCCEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
GNYKITLPKKKEVYKPLREELEKINHLASHYVDKAINDAFSILTSWRKRAIKGRASIEKP
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RVKKAYVRIKTTLRKVVGESVRITVRPYEYITFSWSKSWFSRRVRELELGEPIIKEEKVY
CHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEE
LPFRYKLPWVTPLNFLAIDSNLYTLDAYDGEKFVTISLKQLYSLKYSMEVKRAKVQSFAS
EEEEECCCCCCCCEEEEECCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
KHTKRGRELMRKYSHRERNRVLDFVHKFVNTLLDLYPMTFFAVEKLNKESMFKDANDSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHH
RKISRTVWRSIHRVLKYKAPLYGSFVKEVNPYLTSRSCPRCRFVSRKVGKTFECERCGFK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHCCCCCCHHHHHHHHCCCCCCHHHCCCC
LDRQLNASLNIYLKMCGFPHIRSRVWVGVIPLMGRRGMNVRDFGEAQGLRVDIKYHEIL
CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MLKNLRIRKFEPEEEYVYFTYSIKNSEREKSKELIKEYRTLLQKAIDHLWNLTKIQVRKN
CCCCCCCEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
GNYKITLPKKKEVYKPLREELEKINHLASHYVDKAINDAFSILTSWRKRAIKGRASIEKP
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RVKKAYVRIKTTLRKVVGESVRITVRPYEYITFSWSKSWFSRRVRELELGEPIIKEEKVY
CHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEE
LPFRYKLPWVTPLNFLAIDSNLYTLDAYDGEKFVTISLKQLYSLKYSMEVKRAKVQSFAS
EEEEECCCCCCCCEEEEECCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
KHTKRGRELMRKYSHRERNRVLDFVHKFVNTLLDLYPMTFFAVEKLNKESMFKDANDSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHH
RKISRTVWRSIHRVLKYKAPLYGSFVKEVNPYLTSRSCPRCRFVSRKVGKTFECERCGFK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHCCCCCCHHHHHHHHCCCCCCHHHCCCC
LDRQLNASLNIYLKMCGFPHIRSRVWVGVIPLMGRRGMNVRDFGEAQGLRVDIKYHEIL
CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]