Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
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Accession | NC_002754 |
Length | 2,992,245 |
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The map label for this gene is 15898626
Identifier: 15898626
GI number: 15898626
Start: 1653996
End: 1655258
Strand: Reverse
Name: 15898626
Synonym: SSO1824
Alternate gene names: NA
Gene position: 1655258-1653996 (Counterclockwise)
Preceding gene: 15898627
Following gene: 15898624
Centisome position: 55.32
GC content: 31.12
Gene sequence:
>1263_bases ATGGAGAAATATATTAAAGATCCTATATATGGTAATATAAAGGTCGAGTCTAAGCTTATCGACAACCCTTATTTTCAAAG ACTTAAACATATTATTCAGAACGGAATGGCGTATATGATATTCCCGTCAATGAGGCATACAAGGTTTGAGCACTCCTTAG GCACTTATTATATAGCATCTAAAATGATTGATAGAATAGAAGGAAATATTGATAGTGATTTTAAAGAGATTATCAAAAAA CTGGCGCTATATCATGATATAGGCCATTTTCCATTTTCCCACACGTTTGAATTTGCTTTAGACGTCCTTAAGTATTTGAA TGATGATAAATATAAAGAAATAATTGGACTTACAGAGTATAAAGGACAACTACATAAATTTCATGAAATGATGGGAATAA AGATATTAAAAGATGGATTAGGCGAAAAGGAAGTTGCTGATCTTATGGAGAACGTATACACAAGTAGTAACCCGTTAGAT GATAAGATAAAGATTGCTAAACTTATAGTTAATTCAGATTTAGATGCTGATAGGCTAGACTATTTGCAGAGGGATTCATA TTATTCCGGAGCAAAATTCGGAATTATAGATCCAGAAAGAATAATTATTACAATGACGATTACTCCGAAAGGGTACATAT TTCCACCAAAGGCAATTGATGATCTTGAACATTTCTTTCTAGCAAGATTTCACATGTATAGTTCTGTTTATAATCATCCT GTGATTGAAATTTATAATAGAGTTATGTCATATTTTATTGCTTTTGCAATACATAAAGGTCTTCTGAAGATTCCTTCAAA CTTAGAAGAGATTAAGACATTTACTGACGAACAAGTATTTTTAGCGTTGATTAATGCTAAAAATGATAATGAGCTTTCTC ACTTTTATTTCTCTTTAGTGGAAAGGAGGAAATATAAAAGAGCTGTTTTGCAAGGATCTGAAGCACGTACTTTGCATAAA TATTTAACTGAAGACGAAGATGCAAAAGAATTTTACGAGTATATCTTAGGGTATAAAGGAAAGGTAGTAATAGGTTCTAC AGAACTGAAAACTAGTATAGATAACATACAAATAAAGGAAAAACTAGGTAAATATGAGTATCTTAATAACCTCAAAGAAG AGAGTAGTGTAGTTAAACCGCCAGAAAGATTTAGGGTTCATATAGGCGTTTATGACGATAACGTTGCAAAAGAAATATCT GAATACTTTAGTAAGAATTTTTCCATTACCCTAGATTTTAGAAATTTAGAGTCTAATCCCTAA
Upstream 100 bases:
>100_bases ATGGTGTATAAATATCTCATGTAGCATTTGTTTAATGTGAGGTGCTAGTGTAAATGGCACGCTTAAAATTATTTATATAC ATGTCTCTTGATAAAGATAT
Downstream 100 bases:
>100_bases CTGTGATAGGAGTTTTTTCTCTTCGTCAGTAAATTCTACTTTCTTATTCGCATAATAATGCCATAATTTAAGGCTAGCAC TTTTTATAATATCTTGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MEKYIKDPIYGNIKVESKLIDNPYFQRLKHIIQNGMAYMIFPSMRHTRFEHSLGTYYIASKMIDRIEGNIDSDFKEIIKK LALYHDIGHFPFSHTFEFALDVLKYLNDDKYKEIIGLTEYKGQLHKFHEMMGIKILKDGLGEKEVADLMENVYTSSNPLD DKIKIAKLIVNSDLDADRLDYLQRDSYYSGAKFGIIDPERIIITMTITPKGYIFPPKAIDDLEHFFLARFHMYSSVYNHP VIEIYNRVMSYFIAFAIHKGLLKIPSNLEEIKTFTDEQVFLALINAKNDNELSHFYFSLVERRKYKRAVLQGSEARTLHK YLTEDEDAKEFYEYILGYKGKVVIGSTELKTSIDNIQIKEKLGKYEYLNNLKEESSVVKPPERFRVHIGVYDDNVAKEIS EYFSKNFSITLDFRNLESNP
Sequences:
>Translated_420_residues MEKYIKDPIYGNIKVESKLIDNPYFQRLKHIIQNGMAYMIFPSMRHTRFEHSLGTYYIASKMIDRIEGNIDSDFKEIIKK LALYHDIGHFPFSHTFEFALDVLKYLNDDKYKEIIGLTEYKGQLHKFHEMMGIKILKDGLGEKEVADLMENVYTSSNPLD DKIKIAKLIVNSDLDADRLDYLQRDSYYSGAKFGIIDPERIIITMTITPKGYIFPPKAIDDLEHFFLARFHMYSSVYNHP VIEIYNRVMSYFIAFAIHKGLLKIPSNLEEIKTFTDEQVFLALINAKNDNELSHFYFSLVERRKYKRAVLQGSEARTLHK YLTEDEDAKEFYEYILGYKGKVVIGSTELKTSIDNIQIKEKLGKYEYLNNLKEESSVVKPPERFRVHIGVYDDNVAKEIS EYFSKNFSITLDFRNLESNP >Mature_420_residues MEKYIKDPIYGNIKVESKLIDNPYFQRLKHIIQNGMAYMIFPSMRHTRFEHSLGTYYIASKMIDRIEGNIDSDFKEIIKK LALYHDIGHFPFSHTFEFALDVLKYLNDDKYKEIIGLTEYKGQLHKFHEMMGIKILKDGLGEKEVADLMENVYTSSNPLD DKIKIAKLIVNSDLDADRLDYLQRDSYYSGAKFGIIDPERIIITMTITPKGYIFPPKAIDDLEHFFLARFHMYSSVYNHP VIEIYNRVMSYFIAFAIHKGLLKIPSNLEEIKTFTDEQVFLALINAKNDNELSHFYFSLVERRKYKRAVLQGSEARTLHK YLTEDEDAKEFYEYILGYKGKVVIGSTELKTSIDNIQIKEKLGKYEYLNNLKEESSVVKPPERFRVHIGVYDDNVAKEIS EYFSKNFSITLDFRNLESNP
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=375, Percent_Identity=24, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17537827, Length=298, Percent_Identity=30.8724832214765, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17537829, Length=298, Percent_Identity=30.8724832214765, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24666702, Length=298, Percent_Identity=26.510067114094, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI221512937, Length=298, Percent_Identity=26.510067114094, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 - InterPro: IPR006675 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49216; Mature: 49216
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKYIKDPIYGNIKVESKLIDNPYFQRLKHIIQNGMAYMIFPSMRHTRFEHSLGTYYIAS CCCCCCCCCCCCEEEEEEHHCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH KMIDRIEGNIDSDFKEIIKKLALYHDIGHFPFSHTFEFALDVLKYLNDDKYKEIIGLTEY HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH KGQLHKFHEMMGIKILKDGLGEKEVADLMENVYTSSNPLDDKIKIAKLIVNSDLDADRLD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHH YLQRDSYYSGAKFGIIDPERIIITMTITPKGYIFPPKAIDDLEHFFLARFHMYSSVYNHP HHHCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH VIEIYNRVMSYFIAFAIHKGLLKIPSNLEEIKTFTDEQVFLALINAKNDNELSHFYFSLV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH ERRKYKRAVLQGSEARTLHKYLTEDEDAKEFYEYILGYKGKVVIGSTELKTSIDNIQIKE HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHCCHHHH KLGKYEYLNNLKEESSVVKPPERFRVHIGVYDDNVAKEISEYFSKNFSITLDFRNLESNP HHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure MEKYIKDPIYGNIKVESKLIDNPYFQRLKHIIQNGMAYMIFPSMRHTRFEHSLGTYYIAS CCCCCCCCCCCCEEEEEEHHCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH KMIDRIEGNIDSDFKEIIKKLALYHDIGHFPFSHTFEFALDVLKYLNDDKYKEIIGLTEY HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH KGQLHKFHEMMGIKILKDGLGEKEVADLMENVYTSSNPLDDKIKIAKLIVNSDLDADRLD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHH YLQRDSYYSGAKFGIIDPERIIITMTITPKGYIFPPKAIDDLEHFFLARFHMYSSVYNHP HHHCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH VIEIYNRVMSYFIAFAIHKGLLKIPSNLEEIKTFTDEQVFLALINAKNDNELSHFYFSLV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH ERRKYKRAVLQGSEARTLHKYLTEDEDAKEFYEYILGYKGKVVIGSTELKTSIDNIQIKE HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHCCHHHH KLGKYEYLNNLKEESSVVKPPERFRVHIGVYDDNVAKEISEYFSKNFSITLDFRNLESNP HHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]