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The map label for this gene is 15898559

Identifier: 15898559

GI number: 15898559

Start: 1595911

End: 1596495

Strand: Reverse

Name: 15898559

Synonym: SSO1760

Alternate gene names: NA

Gene position: 1596495-1595911 (Counterclockwise)

Preceding gene: 15898560

Following gene: 15898558

Centisome position: 53.35

GC content: 38.63

Gene sequence:

>585_bases
ATGCTAAGACCTAAGGAAGCATGCCAAAGACTAGGAATATCCTATGCAACACTTAGAGAATACGTTAAGAAAGGATACAT
AAAACCAGTTATACTACAGAGCGGAAAATGGAGATTCAGAGAAGAAGACGTAGAGAAATTAATGGGAATAGTGAAAAGGA
GAAAGGTGGTACTTTACGCCAGAGTATCATCTTCCACGCAAAAAGACGATCTAGTAAACCAAGTGAAGTACCTAGAGGAA
CAAGTCAAAGAATACGACCAAGTTATCACAGACATAGGTTCCGGGTTAAACATGAAGAGAAAGGGGTTCTTGAAGTTGTT
GAGAATGATATTAAACAACGAAGTATCACGCGTAGTTATTGCTTACCCAGACAGACTTGTTAGATTCGGCTTCGAAATCC
TAGAGGAAGTGTGCAAATCACACAACTGTGAAATAGTAGTAATAAACCAAGAGGACAAGACACCGGAAGAAGAATTGGTT
GAAGACTTAGTCTCAATACTAGTCTTGTTCAGTGGGAAACTGTATGGTATGAGAAGTCATGAATACGAAAAGGTGAAGAA
ATGTGTTGAAGAACTTAAGGCTTAA

Upstream 100 bases:

>100_bases
ACGTTCTCAATAGTATTCCCAATCTGACTTCCTCACGCCTTTGCCAACAGTTTCCGATAAACCGTAAAGTTTATATTATT
TTGCCACAAACTCTTATACA

Downstream 100 bases:

>100_bases
GTCATTCCAACCAGGGAAAGAGTACGTTAGTATTTTGGAAAAGTTCTTAGACTATGATCTAGTGGTATATCCTTTGCCTA
AAGCTATAAACTTTCTGAAA

Product: ORF in partial transposon ISC1778

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVEKLMGIVKRRKVVLYARVSSSTQKDDLVNQVKYLEE
QVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVIAYPDRLVRFGFEILEEVCKSHNCEIVVINQEDKTPEEELV
EDLVSILVLFSGKLYGMRSHEYEKVKKCVEELKA

Sequences:

>Translated_194_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVEKLMGIVKRRKVVLYARVSSSTQKDDLVNQVKYLEE
QVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVIAYPDRLVRFGFEILEEVCKSHNCEIVVINQEDKTPEEELV
EDLVSILVLFSGKLYGMRSHEYEKVKKCVEELKA
>Mature_194_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVEKLMGIVKRRKVVLYARVSSSTQKDDLVNQVKYLEE
QVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVIAYPDRLVRFGFEILEEVCKSHNCEIVVINQEDKTPEEELV
EDLVSILVLFSGKLYGMRSHEYEKVKKCVEELKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22664; Mature: 22664

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVEKLMGIVKRRKVVLYA
CCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEE
RVSSSTQKDDLVNQVKYLEEQVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVI
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHEEEE
AYPDRLVRFGFEILEEVCKSHNCEIVVINQEDKTPEEELVEDLVSILVLFSGKLYGMRSH
ECHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCH
EYEKVKKCVEELKA
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVEKLMGIVKRRKVVLYA
CCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEE
RVSSSTQKDDLVNQVKYLEEQVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVI
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHEEEE
AYPDRLVRFGFEILEEVCKSHNCEIVVINQEDKTPEEELVEDLVSILVLFSGKLYGMRSH
ECHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCH
EYEKVKKCVEELKA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]