Click here to switch to the map view.

The map label for this gene is 15898497

Identifier: 15898497

GI number: 15898497

Start: 1536092

End: 1536595

Strand: Reverse

Name: 15898497

Synonym: SSO1683

Alternate gene names: NA

Gene position: 1536595-1536092 (Counterclockwise)

Preceding gene: 15898498

Following gene: 15898493

Centisome position: 51.35

GC content: 42.86

Gene sequence:

>504_bases
GTGAGGAGGATTGAGATAAGGGCCTTCACGTATCTAACGATCTTGAAGGGTGAGCTCAAGAATTTCACAGCTAAGTCTAC
GGTGTTTGACGAGTTCTGGACTTATTTCCGTGTTAGGCATGGAGTGATGAGGGAGGATTTGTGGATTTGGACTGCTGATG
GGGTGCCTTTCTATGAGTTTGGGGATAGGAGTTATGGGACTTTTCGTTTGGGTTGGTTACCTAGGAGTGAGGTAAACTAT
ACTGACTACTATTGTGTTTATCAAGTTCTCGATAATCGTGTAGCGGGTAAGAAGTATACTTATCTTGTGGAGAGTCATAA
TTCTTGGTGTAGGTTAGCGAGGCTGGCTAGGGATACTAAAGCTGTTACTAGGAGTATGAGGATGACGGAGTACAGTTTGG
CCTTGTTGAATGTAATGTACCCTCACGTATTTTCAAGGGAGGGAACTCCCTTAAATGAGACTTACTTGAAGGGAGTACAG
TATATTAGAGAGAACTTGATATAA

Upstream 100 bases:

>100_bases
TGGATAGGGAACAGAGGAAGAGAATCTTAAAGGAGTACTTGAACAGGATGAGCATGAGGGCAATATCAAGAGTTGAAGGT
AAACCATTGAATACAGCCTA

Downstream 100 bases:

>100_bases
TTTTACTATATGATATCGAATAAGATGACTGCATGAGAACACTCCCGTTAAATCTTCCCTAACGTATCCGCATCTAGCAC
AAGTCATCGACGTGTATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Second ORF In Transposon ISC; Transposase ISC; Partial Transposase ISC; Partial Transposase In ISC

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRRIEIRAFTYLTILKGELKNFTAKSTVFDEFWTYFRVRHGVMREDLWIWTADGVPFYEFGDRSYGTFRLGWLPRSEVNY
TDYYCVYQVLDNRVAGKKYTYLVESHNSWCRLARLARDTKAVTRSMRMTEYSLALLNVMYPHVFSREGTPLNETYLKGVQ
YIRENLI

Sequences:

>Translated_167_residues
MRRIEIRAFTYLTILKGELKNFTAKSTVFDEFWTYFRVRHGVMREDLWIWTADGVPFYEFGDRSYGTFRLGWLPRSEVNY
TDYYCVYQVLDNRVAGKKYTYLVESHNSWCRLARLARDTKAVTRSMRMTEYSLALLNVMYPHVFSREGTPLNETYLKGVQ
YIRENLI
>Mature_167_residues
MRRIEIRAFTYLTILKGELKNFTAKSTVFDEFWTYFRVRHGVMREDLWIWTADGVPFYEFGDRSYGTFRLGWLPRSEVNY
TDYYCVYQVLDNRVAGKKYTYLVESHNSWCRLARLARDTKAVTRSMRMTEYSLALLNVMYPHVFSREGTPLNETYLKGVQ
YIRENLI

Specific function: Unknown

COG id: COG1662

COG function: function code L; Transposase and inactivated derivatives, IS1 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20026; Mature: 20026

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIEIRAFTYLTILKGELKNFTAKSTVFDEFWTYFRVRHGVMREDLWIWTADGVPFYEF
CCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEC
GDRSYGTFRLGWLPRSEVNYTDYYCVYQVLDNRVAGKKYTYLVESHNSWCRLARLARDTK
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHH
AVTRSMRMTEYSLALLNVMYPHVFSREGTPLNETYLKGVQYIRENLI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRIEIRAFTYLTILKGELKNFTAKSTVFDEFWTYFRVRHGVMREDLWIWTADGVPFYEF
CCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEC
GDRSYGTFRLGWLPRSEVNYTDYYCVYQVLDNRVAGKKYTYLVESHNSWCRLARLARDTK
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHH
AVTRSMRMTEYSLALLNVMYPHVFSREGTPLNETYLKGVQYIRENLI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA