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The map label for this gene is 15898468

Identifier: 15898468

GI number: 15898468

Start: 1502702

End: 1503115

Strand: Reverse

Name: 15898468

Synonym: SSO1650

Alternate gene names: NA

Gene position: 1503115-1502702 (Counterclockwise)

Preceding gene: 15898469

Following gene: 15898466

Centisome position: 50.23

GC content: 42.51

Gene sequence:

>414_bases
ATGGAAACTATAACAATTGACGAGAAAACCCTCTACAACCTCACTCAGCCAAGTGAGGTCATAGAAGAGCTTACACATCT
CAACGGAAACCTCACGCTCGTCCCCAATATACTATCTGAAGAGGCCTCATTAAACAAATCGGTCAAGGAGATCGAGAAAA
TAGCCTTAGAAGATACTGACAAGACTAGCCCAAAGCACGTGAGGGGTATAAGAAGGAAAGATTATACAAAGTACAGATTC
CTCAAGGGATTCAAGATCATGTTAAAAGGGAGAGAAGTCATTTACAAGCTAGAGTGGATCTCGGTGGAACTACCCGTACT
GTACAATAAGGGAAGGGTGAAGACTCAAGTGGAGGAAATGTTATTAAGGGAGGAGAAGGTGTTCAAGGCTCTGATGACCA
TCTATTCTGTATAG

Upstream 100 bases:

>100_bases
GGATCCACTGCGATTTCAATTTGTTTCTCTAAAAACAGATAAGAATAATTGATTCTACATTTTCGATAATACTAATAAGA
GACAAGCGTGAGGTAATATC

Downstream 100 bases:

>100_bases
CACTTTACGGTTTTCTCCTCCTCTTGAACAGTTTTTTGATCCCACCCGCCTCACGGTAAATGCTTTTTATCAATCTGGCC
AACCTTTTGGCCCCGAGCAT

Product: transposon ISC1250 Orf1

Products: NA

Alternate protein names: Partial Transposase ISC

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
METITIDEKTLYNLTQPSEVIEELTHLNGNLTLVPNILSEEASLNKSVKEIEKIALEDTDKTSPKHVRGIRRKDYTKYRF
LKGFKIMLKGREVIYKLEWISVELPVLYNKGRVKTQVEEMLLREEKVFKALMTIYSV

Sequences:

>Translated_137_residues
METITIDEKTLYNLTQPSEVIEELTHLNGNLTLVPNILSEEASLNKSVKEIEKIALEDTDKTSPKHVRGIRRKDYTKYRF
LKGFKIMLKGREVIYKLEWISVELPVLYNKGRVKTQVEEMLLREEKVFKALMTIYSV
>Mature_137_residues
METITIDEKTLYNLTQPSEVIEELTHLNGNLTLVPNILSEEASLNKSVKEIEKIALEDTDKTSPKHVRGIRRKDYTKYRF
LKGFKIMLKGREVIYKLEWISVELPVLYNKGRVKTQVEEMLLREEKVFKALMTIYSV

Specific function: Unknown

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16032; Mature: 16032

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METITIDEKTLYNLTQPSEVIEELTHLNGNLTLVPNILSEEASLNKSVKEIEKIALEDTD
CCEEECCHHHHHCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCC
KTSPKHVRGIRRKDYTKYRFLKGFKIMLKGREVIYKLEWISVELPVLYNKGRVKTQVEEM
CCCHHHHHHHHHCCHHHHHHHHHHHHEEECCCEEEEEEEEEEEECEEECCCCHHHHHHHH
LLREEKVFKALMTIYSV
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METITIDEKTLYNLTQPSEVIEELTHLNGNLTLVPNILSEEASLNKSVKEIEKIALEDTD
CCEEECCHHHHHCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCC
KTSPKHVRGIRRKDYTKYRFLKGFKIMLKGREVIYKLEWISVELPVLYNKGRVKTQVEEM
CCCHHHHHHHHHCCHHHHHHHHHHHHEEECCCEEEEEEEEEEEECEEECCCCHHHHHHHH
LLREEKVFKALMTIYSV
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA