Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
---|---|
Accession | NC_002754 |
Length | 2,992,245 |
Click here to switch to the map view.
The map label for this gene is 15898191
Identifier: 15898191
GI number: 15898191
Start: 1187005
End: 1187811
Strand: Direct
Name: 15898191
Synonym: SSO1350
Alternate gene names: NA
Gene position: 1187005-1187811 (Clockwise)
Preceding gene: 15898187
Following gene: 15898192
Centisome position: 39.67
GC content: 41.51
Gene sequence:
>807_bases ATGACTTTCTCAATAGTCATTTACGATCCCGATGAAAAGGCTTGGGGTGTAGGAGTAGCAAGTAAATTCCTAGCTGTTGG TGCATTTGTACCGTGGTTGAAACCAAATGTTGGCGCAATTGCTACGCAAGCTTTAGCTAATTTAACATATGGTATAAATG GGCTATCCTTGTTGGAAAAGGGTTATAGTGCGTCTGATTCAATAAGGATTCTCACAGAATCGGATCCGTTAAGGGAGAAG AGACAAATCGGCATTGTCGACTCTAAGGGAAATGCTTCAGCCTTTACTGGAAGGGAATGCTATTCGTACGCTGGACACAT AGTTGGAAATAACTTCACCGTGCAAGGCAATATATTAGCCGGAGAAGAGGTTTTAGAGGCAATGGCAAAGGAGGCTGAAG GTAAGGGTAAAATTTATGAGAAGATTCTTAGAGCGTTAAAGGCTGGTGAGAGTAAAGGTGGTGATAGAAGAGGAAAACAG AGTGCTGCAATAATTGTAGTTAGAGCAGTTGAAAGGAGTGAGAGGGAAATTGATCCTTTAGTAGTAGGAAAGTACGTGGA TTTGAGGGTTGATGATAGCCCAGACCCCTTGAGGGATTTGGAGAGGCTATTGGATCTATGGGTTGCTACTTTTGTTGAGG AGGAAATGGTGAACGTTAAGGATTATGAGGATCAGATTAGGGATGCTTTGAAAAGATGGGGATATAGCGATTTGAGAACC TGGGTTGAGATAAACAATTTTGAGGGGAAGTATACTGGGGATAAGATCGGTAAAAGTGTGTTGAAGATTTTACTATCTAA AGGTTAA
Upstream 100 bases:
>100_bases GTTTGTAATTATATTATCTATTTGCCTTAAGCTATGTGGCCACATTGTACTATGCAACGGTGAATTACTTATATATGCAA AAGTTGAGAATATACATGCT
Downstream 100 bases:
>100_bases GAGTTTAAAAATTAATTTATTATAAAGTGAGGAGTAAAAGATTAAATAGTTAAACATTCATCTCTTAAATATGCAATACA AATGGGTTGCCTTAAGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTFSIVIYDPDEKAWGVGVASKFLAVGAFVPWLKPNVGAIATQALANLTYGINGLSLLEKGYSASDSIRILTESDPLREK RQIGIVDSKGNASAFTGRECYSYAGHIVGNNFTVQGNILAGEEVLEAMAKEAEGKGKIYEKILRALKAGESKGGDRRGKQ SAAIIVVRAVERSEREIDPLVVGKYVDLRVDDSPDPLRDLERLLDLWVATFVEEEMVNVKDYEDQIRDALKRWGYSDLRT WVEINNFEGKYTGDKIGKSVLKILLSKG
Sequences:
>Translated_268_residues MTFSIVIYDPDEKAWGVGVASKFLAVGAFVPWLKPNVGAIATQALANLTYGINGLSLLEKGYSASDSIRILTESDPLREK RQIGIVDSKGNASAFTGRECYSYAGHIVGNNFTVQGNILAGEEVLEAMAKEAEGKGKIYEKILRALKAGESKGGDRRGKQ SAAIIVVRAVERSEREIDPLVVGKYVDLRVDDSPDPLRDLERLLDLWVATFVEEEMVNVKDYEDQIRDALKRWGYSDLRT WVEINNFEGKYTGDKIGKSVLKILLSKG >Mature_267_residues TFSIVIYDPDEKAWGVGVASKFLAVGAFVPWLKPNVGAIATQALANLTYGINGLSLLEKGYSASDSIRILTESDPLREKR QIGIVDSKGNASAFTGRECYSYAGHIVGNNFTVQGNILAGEEVLEAMAKEAEGKGKIYEKILRALKAGESKGGDRRGKQS AAIIVVRAVERSEREIDPLVVGKYVDLRVDDSPDPLRDLERLLDLWVATFVEEEMVNVKDYEDQIRDALKRWGYSDLRTW VEINNFEGKYTGDKIGKSVLKILLSKG
Specific function: Unknown
COG id: COG3342
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29577; Mature: 29446
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSIVIYDPDEKAWGVGVASKFLAVGAFVPWLKPNVGAIATQALANLTYGINGLSLLEK CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHC GYSASDSIRILTESDPLREKRQIGIVDSKGNASAFTGRECYSYAGHIVGNNFTVQGNILA CCCCCCCEEEEECCCCCHHHHHCCEEECCCCCCCCCCHHHHHHHCCEECCCEEEEECEEC GEEVLEAMAKEAEGKGKIYEKILRALKAGESKGGDRRGKQSAAIIVVRAVERSEREIDPL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCCE VVGKYVDLRVDDSPDPLRDLERLLDLWVATFVEEEMVNVKDYEDQIRDALKRWGYSDLRT EECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHH WVEINNFEGKYTGDKIGKSVLKILLSKG HEEEECCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TFSIVIYDPDEKAWGVGVASKFLAVGAFVPWLKPNVGAIATQALANLTYGINGLSLLEK EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHC GYSASDSIRILTESDPLREKRQIGIVDSKGNASAFTGRECYSYAGHIVGNNFTVQGNILA CCCCCCCEEEEECCCCCHHHHHCCEEECCCCCCCCCCHHHHHHHCCEECCCEEEEECEEC GEEVLEAMAKEAEGKGKIYEKILRALKAGESKGGDRRGKQSAAIIVVRAVERSEREIDPL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCCE VVGKYVDLRVDDSPDPLRDLERLLDLWVATFVEEEMVNVKDYEDQIRDALKRWGYSDLRT EECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHH WVEINNFEGKYTGDKIGKSVLKILLSKG HEEEECCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA