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The map label for this gene is 15898016

Identifier: 15898016

GI number: 15898016

Start: 1001045

End: 1001473

Strand: Reverse

Name: 15898016

Synonym: SSO1161

Alternate gene names: NA

Gene position: 1001473-1001045 (Counterclockwise)

Preceding gene: 15898018

Following gene: 15898015

Centisome position: 33.47

GC content: 32.63

Gene sequence:

>429_bases
GTGATTCCACCTAAGTTTAGAGAATATTCTAAGGCCTTCTTAAATATAGCAAAAAAAGATAATATTAGAGCTAAAAGAGC
TTTAGAGCTTAAAGATTATCCTGAATGTCTCTTTTACTCTCAACAATCTGTTGAAAAAAGCGTGAAAGCGATGTTAGAAG
TAAAATTGATATATAAGAAAGAACACGACATTATAGCAGATGCTTCGAATAATTTACAAGATCTTGGAAACGAATTAGAT
GTAGTCTTGAACGCATTAGACTATCTTTCTGGCGCATGGAACATATCTAGATACCCGTTTTTTAACGGAAATAATATAAC
TACCCCAGAGGAGTTTGTAACTGAGGAAATGTGTAAAGAAGGAATAAAGTATTCTGATGAGGTGATCGAAATTGCAGAGA
ATTATCTTAGAAAACATGGAGTTATTTAG

Upstream 100 bases:

>100_bases
AATTTCTGTGAAGCATAAAAAGGGAGATTAGCACTAAGATCTGATAGTATAAATAAAAAGACTTCTCAAAAGATTTATTC
TTTTGCTTTGAAAGTTACTT

Downstream 100 bases:

>100_bases
AAAAGCCACCTTTTTATTGAGAAGAGAAGGAGTACTTGCAATAGTATTCTTTGGAAGTAGAGTTATGGGGAAATATAAGA
AGGACTCTGATTTGGATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIPPKFREYSKAFLNIAKKDNIRAKRALELKDYPECLFYSQQSVEKSVKAMLEVKLIYKKEHDIIADASNNLQDLGNELD
VVLNALDYLSGAWNISRYPFFNGNNITTPEEFVTEEMCKEGIKYSDEVIEIAENYLRKHGVI

Sequences:

>Translated_142_residues
MIPPKFREYSKAFLNIAKKDNIRAKRALELKDYPECLFYSQQSVEKSVKAMLEVKLIYKKEHDIIADASNNLQDLGNELD
VVLNALDYLSGAWNISRYPFFNGNNITTPEEFVTEEMCKEGIKYSDEVIEIAENYLRKHGVI
>Mature_142_residues
MIPPKFREYSKAFLNIAKKDNIRAKRALELKDYPECLFYSQQSVEKSVKAMLEVKLIYKKEHDIIADASNNLQDLGNELD
VVLNALDYLSGAWNISRYPFFNGNNITTPEEFVTEEMCKEGIKYSDEVIEIAENYLRKHGVI

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16443; Mature: 16443

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPPKFREYSKAFLNIAKKDNIRAKRALELKDYPECLFYSQQSVEKSVKAMLEVKLIYKK
CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHDIIADASNNLQDLGNELDVVLNALDYLSGAWNISRYPFFNGNNITTPEEFVTEEMCKE
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHH
GIKYSDEVIEIAENYLRKHGVI
CCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIPPKFREYSKAFLNIAKKDNIRAKRALELKDYPECLFYSQQSVEKSVKAMLEVKLIYKK
CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHDIIADASNNLQDLGNELDVVLNALDYLSGAWNISRYPFFNGNNITTPEEFVTEEMCKE
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHH
GIKYSDEVIEIAENYLRKHGVI
CCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA