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The map label for this gene is opp-2C

Identifier: 15926961

GI number: 15926961

Start: 1385875

End: 1386705

Strand: Reverse

Name: opp-2C

Synonym: SA1213

Alternate gene names: 15926961

Gene position: 1386705-1385875 (Counterclockwise)

Preceding gene: 15926962

Following gene: 15926960

Centisome position: 49.26

GC content: 32.25

Gene sequence:

>831_bases
ATGCATAAAATATTTTCAAAGAATAACCTGATATTTTTTGTATTCGTTGCATTTATTTTTGTGGTAATTGTACTGCAATT
CTTTGTCAGTAGTGAAAATGCAACCAAAGTCAATTTATCACAAACTTTTGAACCTATTAGTTGGTTGCATTTATTAGGAA
CTGATGATTATGGGAGAGATTTATTTACCCGAATTATTATCGGTGCACGTTCAACATTGTTTGTTACTGTTTTAACATTA
ATAGCTATCGTTGTCATAGGTGTTACACTAGGTCTATTTGCCGGATATAAAAAAGGGTGGATTGAACGATTAGTGTTAAG
GTTTATTGATGTTGGTCTAAGTATTCCAGAATTTATCATCATGATTGCTTTAGCAAGCTTTTTTCAACCATCTTTGTGGA
ATTTAGTTATCTCAATTACAGTAATAAAATGGATGAATTACACAAGGTTGACTAGAAGTATAGTTAATAGCGAAATGAAT
AAGCCTTATATAAAAATGGCACAATTATTTCATGTACCTACAAGAACAATATTAATACGTCATTTAACACCTAAAATTAT
ACCGGCTATTATCGTTTTGATGGTCGTTGATTTCGGTAAAATCATTTTATATATAAGTTCACTATCATTTATTGGGTTAG
GTGCACAACCGCCAACACCAGAGTGGGGCGCTATGTTGCAACAAGGTCGTGATTTTATTTCGTCTCATCCAATTATGTTG
ATTGCACCTGCTTCAGTCATTGCTATAACTATTTTAATTTTTAATTTAACCGGAGATGCGCTAAGAGATAGATTGCTAAA
ACAACGAGGTGAATATGATGAGTCTCATTGA

Upstream 100 bases:

>100_bases
GATTTATTAACGTTATTACTTGATCCGAAGCAGCGTTTACAATTAGGAAATCCAAAAAACAAAACCAATACACCATTGAT
ATCAGAAAGTAGTGACCGTC

Downstream 100 bases:

>100_bases
TATACAAAATTTAACAATAAAGAATACTTGTGAGAAATATCTTATTAAAGGGATTGATTTGAAAATTTTTAGTCAACAGA
TTAATGCCTTGATTGGAGAG

Product: oligopeptide transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENATKVNLSQTFEPISWLHLLGTDDYGRDLFTRIIIGARSTLFVTVLTL
IAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFIIMIALASFFQPSLWNLVISITVIKWMNYTRLTRSIVNSEMN
KPYIKMAQLFHVPTRTILIRHLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIML
IAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH

Sequences:

>Translated_276_residues
MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENATKVNLSQTFEPISWLHLLGTDDYGRDLFTRIIIGARSTLFVTVLTL
IAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFIIMIALASFFQPSLWNLVISITVIKWMNYTRLTRSIVNSEMN
KPYIKMAQLFHVPTRTILIRHLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIML
IAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH
>Mature_276_residues
MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENATKVNLSQTFEPISWLHLLGTDDYGRDLFTRIIIGARSTLFVTVLTL
IAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFIIMIALASFFQPSLWNLVISITVIKWMNYTRLTRSIVNSEMN
KPYIKMAQLFHVPTRTILIRHLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIML
IAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH

Specific function: Part of a transport system that may be involved in oligopeptide uptake. Probably responsible for the translocation of the substrate across the membrane. Important for S.aureus growth and survival during the infection process [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=216, Percent_Identity=37.5, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1787760, Length=257, Percent_Identity=30.3501945525292, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1789964, Length=228, Percent_Identity=37.719298245614, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789889, Length=216, Percent_Identity=31.9444444444444, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787498, Length=265, Percent_Identity=31.6981132075472, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1787549, Length=211, Percent_Identity=33.175355450237, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788505, Length=236, Percent_Identity=32.6271186440678, Blast_Score=104, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31242; Mature: 31242

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENATKVNLSQTFEPISWLHLLGTDDYGRD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHH
LFTRIIIGARSTLFVTVLTLIAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFII
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MIALASFFQPSLWNLVISITVIKWMNYTRLTRSIVNSEMNKPYIKMAQLFHVPTRTILIR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
HLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIML
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCEEE
IAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH
EECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENATKVNLSQTFEPISWLHLLGTDDYGRD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHH
LFTRIIIGARSTLFVTVLTLIAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFII
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MIALASFFQPSLWNLVISITVIKWMNYTRLTRSIVNSEMNKPYIKMAQLFHVPTRTILIR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
HLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIML
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCEEE
IAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH
EECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA