| Definition | Staphylococcus aureus subsp. aureus N315, complete genome. |
|---|---|
| Accession | NC_002745 |
| Length | 2,814,816 |
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The map label for this gene is opp-2D
Identifier: 15926960
GI number: 15926960
Start: 1385115
End: 1385888
Strand: Reverse
Name: opp-2D
Synonym: SA1212
Alternate gene names: 15926960
Gene position: 1385888-1385115 (Counterclockwise)
Preceding gene: 15926961
Following gene: 15926959
Centisome position: 49.24
GC content: 31.14
Gene sequence:
>774_bases ATGAGTCTCATTGATATACAAAATTTAACAATAAAGAATACTTGTGAGAAATATCTTATTAAAGGGATTGATTTGAAAAT TTTTAGTCAACAGATTAATGCCTTGATTGGAGAGAGCGGCGCTGGGAAAAGTTTGATTGCTAAAGCCTTACTTGAATATT TACCATTTGATTTAAGCTGCACGTATGATTCGTACCAATTTGATGGAGAAAATATTAGTAGATTGAGTCAATATTATGGT CATACAATTGGTTATATTTCTCAAAATTATGCAGAAAGTTTTAACGACCATACTAAATTAGGTAAACAGTTAACTGCGAT TTATCGTAAGCATTATAAAAGTAGTAAAGAAGAGGCTTTGTCAAAAATTGACAAGGCTTTGTCGTGGGTTAATTTACAAA GCAAAGATATATTAAATAAATATAGTTTCCAACTTTCTGGGGGCCAACTTGAACGCGTTTACATAGCAAGCGTTCTCATG TTGGAGCCTAAATTAATCATTGCAGACGAACCAGTTGCATCATTGGATGCTTTGAACGGTAATCAAGTGATGGATTTATT ACAGCATATTGTATTAGAACATGGTCAAACATTATTTATTATCACACATAACTTAAGTCATGTATTGAAATATTGTCAGT ACATTTATGTTTTAAAAGAAGGTCAAATCATTGAACGAGGTAATATTAATCATTTCAAGTATGAGCATTTGCATCCGTAT ACTGAACGTCTAATTAAATATAGAACACAATTAAAGAGGGATTACTATGATTGA
Upstream 100 bases:
>100_bases TTGATTGCACCTGCTTCAGTCATTGCTATAACTATTTTAATTTTTAATTTAACCGGAGATGCGCTAAGAGATAGATTGCT AAAACAACGAGGTGAATATG
Downstream 100 bases:
>100_bases GTTAAAACATGTGACTTTTGGTTATAATAAAAAGCAGATGGTGCTACAAGATATCAATATTACTATACCTGATGGAGAAA ATGTTGGTATTTTAGGCGAA
Product: oligopeptide transport ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSLIDIQNLTIKNTCEKYLIKGIDLKIFSQQINALIGESGAGKSLIAKALLEYLPFDLSCTYDSYQFDGENISRLSQYYG HTIGYISQNYAESFNDHTKLGKQLTAIYRKHYKSSKEEALSKIDKALSWVNLQSKDILNKYSFQLSGGQLERVYIASVLM LEPKLIIADEPVASLDALNGNQVMDLLQHIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQIIERGNINHFKYEHLHPY TERLIKYRTQLKRDYYD
Sequences:
>Translated_257_residues MSLIDIQNLTIKNTCEKYLIKGIDLKIFSQQINALIGESGAGKSLIAKALLEYLPFDLSCTYDSYQFDGENISRLSQYYG HTIGYISQNYAESFNDHTKLGKQLTAIYRKHYKSSKEEALSKIDKALSWVNLQSKDILNKYSFQLSGGQLERVYIASVLM LEPKLIIADEPVASLDALNGNQVMDLLQHIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQIIERGNINHFKYEHLHPY TERLIKYRTQLKRDYYD >Mature_256_residues SLIDIQNLTIKNTCEKYLIKGIDLKIFSQQINALIGESGAGKSLIAKALLEYLPFDLSCTYDSYQFDGENISRLSQYYGH TIGYISQNYAESFNDHTKLGKQLTAIYRKHYKSSKEEALSKIDKALSWVNLQSKDILNKYSFQLSGGQLERVYIASVLML EPKLIIADEPVASLDALNGNQVMDLLQHIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQIIERGNINHFKYEHLHPYT ERLIKYRTQLKRDYYD
Specific function: Part of a transport system that may be involved in oligopeptide uptake. Probably responsible for energy coupling to the transport system. Important for S.aureus growth and survival during the infection process [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI156105685, Length=235, Percent_Identity=27.6595744680851, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI255708477, Length=213, Percent_Identity=27.2300469483568, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI9955963, Length=231, Percent_Identity=26.4069264069264, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI42741659, Length=227, Percent_Identity=27.7533039647577, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI171184400, Length=230, Percent_Identity=27.8260869565217, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI9961252, Length=221, Percent_Identity=27.1493212669683, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI9961250, Length=221, Percent_Identity=27.1493212669683, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI4505771, Length=221, Percent_Identity=27.1493212669683, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI9955968, Length=234, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI9955966, Length=234, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI45243524, Length=234, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787759, Length=236, Percent_Identity=31.3559322033898, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1788506, Length=255, Percent_Identity=32.5490196078431, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1787548, Length=264, Percent_Identity=28.7878787878788, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI145693107, Length=265, Percent_Identity=28.3018867924528, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI48994883, Length=224, Percent_Identity=32.1428571428571, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1789963, Length=263, Percent_Identity=26.9961977186312, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1789890, Length=246, Percent_Identity=28.4552845528455, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1787500, Length=231, Percent_Identity=30.7359307359307, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1789891, Length=213, Percent_Identity=30.9859154929577, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1789962, Length=239, Percent_Identity=28.0334728033473, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1788225, Length=252, Percent_Identity=26.984126984127, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787758, Length=239, Percent_Identity=28.0334728033473, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1790544, Length=257, Percent_Identity=28.4046692607004, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1786398, Length=233, Percent_Identity=28.755364806867, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87081791, Length=239, Percent_Identity=28.4518828451883, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787105, Length=216, Percent_Identity=29.6296296296296, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1787547, Length=262, Percent_Identity=26.3358778625954, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1787089, Length=216, Percent_Identity=28.7037037037037, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788761, Length=256, Percent_Identity=27.34375, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786563, Length=247, Percent_Identity=27.1255060728745, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI48994997, Length=232, Percent_Identity=25.4310344827586, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1786803, Length=220, Percent_Identity=29.0909090909091, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1788450, Length=197, Percent_Identity=25.8883248730964, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790162, Length=241, Percent_Identity=26.5560165975104, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786872, Length=199, Percent_Identity=30.1507537688442, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1786345, Length=231, Percent_Identity=23.3766233766234, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1787112, Length=221, Percent_Identity=28.5067873303167, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI87081709, Length=232, Percent_Identity=26.2931034482759, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787029, Length=229, Percent_Identity=27.9475982532751, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1789032, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1786703, Length=216, Percent_Identity=28.2407407407407, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786319, Length=210, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788644, Length=132, Percent_Identity=31.0606060606061, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=28.0952380952381, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789672, Length=238, Percent_Identity=25.2100840336134, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787143, Length=227, Percent_Identity=26.431718061674, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1789593, Length=227, Percent_Identity=23.7885462555066, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787113, Length=236, Percent_Identity=27.9661016949153, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790467, Length=227, Percent_Identity=25.5506607929515, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787164, Length=216, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787370, Length=215, Percent_Identity=27.4418604651163, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789864, Length=227, Percent_Identity=22.9074889867841, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787712, Length=208, Percent_Identity=25, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787792, Length=220, Percent_Identity=24.0909090909091, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI48995001, Length=212, Percent_Identity=26.8867924528302, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1789586, Length=232, Percent_Identity=25, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI193211017, Length=235, Percent_Identity=28.0851063829787, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI71996809, Length=235, Percent_Identity=28.0851063829787, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI193211015, Length=235, Percent_Identity=28.0851063829787, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI115533592, Length=215, Percent_Identity=29.7674418604651, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115534520, Length=236, Percent_Identity=25.8474576271186, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71992285, Length=234, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI25146777, Length=218, Percent_Identity=28.4403669724771, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17541710, Length=218, Percent_Identity=27.5229357798165, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17558664, Length=216, Percent_Identity=28.2407407407407, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17567269, Length=242, Percent_Identity=28.099173553719, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193209708, Length=217, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193208177, Length=216, Percent_Identity=27.3148148148148, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI212646699, Length=219, Percent_Identity=26.4840182648402, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193202349, Length=215, Percent_Identity=26.5116279069767, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71984940, Length=221, Percent_Identity=29.8642533936652, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17567265, Length=210, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17543740, Length=216, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322640, Length=226, Percent_Identity=26.1061946902655, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323217, Length=203, Percent_Identity=29.064039408867, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6324498, Length=198, Percent_Identity=24.2424242424242, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI23397593, Length=241, Percent_Identity=26.9709543568465, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24641565, Length=222, Percent_Identity=28.3783783783784, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI21357907, Length=231, Percent_Identity=25.5411255411255, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI17136662, Length=216, Percent_Identity=25.462962962963, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI85724858, Length=220, Percent_Identity=28.6363636363636, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI85724856, Length=220, Percent_Identity=28.6363636363636, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580547, Length=220, Percent_Identity=28.6363636363636, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580551, Length=220, Percent_Identity=28.6363636363636, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580549, Length=220, Percent_Identity=28.6363636363636, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580545, Length=220, Percent_Identity=28.6363636363636, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28574744, Length=211, Percent_Identity=27.4881516587678, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI85726357, Length=216, Percent_Identity=26.8518518518519, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 29699; Mature: 29568
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIDIQNLTIKNTCEKYLIKGIDLKIFSQQINALIGESGAGKSLIAKALLEYLPFDLSC CCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE TYDSYQFDGENISRLSQYYGHTIGYISQNYAESFNDHTKLGKQLTAIYRKHYKSSKEEAL CCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SKIDKALSWVNLQSKDILNKYSFQLSGGQLERVYIASVLMLEPKLIIADEPVASLDALNG HHHHHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHCCCC NQVMDLLQHIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQIIERGNINHFKYEHLHPY HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHCCHH TERLIKYRTQLKRDYYD HHHHHHHHHHHHHCCCC >Mature Secondary Structure SLIDIQNLTIKNTCEKYLIKGIDLKIFSQQINALIGESGAGKSLIAKALLEYLPFDLSC CCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE TYDSYQFDGENISRLSQYYGHTIGYISQNYAESFNDHTKLGKQLTAIYRKHYKSSKEEAL CCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SKIDKALSWVNLQSKDILNKYSFQLSGGQLERVYIASVLMLEPKLIIADEPVASLDALNG HHHHHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHCCCC NQVMDLLQHIVLEHGQTLFIITHNLSHVLKYCQYIYVLKEGQIIERGNINHFKYEHLHPY HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHCCHH TERLIKYRTQLKRDYYD HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA