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The map label for this gene is yubA [H]

Identifier: 15926939

GI number: 15926939

Start: 1361923

End: 1363131

Strand: Direct

Name: yubA [H]

Synonym: SA1192

Alternate gene names: 15926939

Gene position: 1361923-1363131 (Clockwise)

Preceding gene: 15926938

Following gene: 15926940

Centisome position: 48.38

GC content: 30.69

Gene sequence:

>1209_bases
TTGAATGAAAATGAAAAGAATATAAGAAAGAATTTTTTAAAATTTACCGAATCACGGTATATGAAGTTTGTTGGTGGGAA
TGATTTAGTCTTCTCATTAATAGCGCTAGTATTGTTGGGTATTGTTATTTTTATTTTCGAAAAAGTATCATATGTTTTTG
ATCCTTTTATCATCGTTTTTAAGACGATAGCAGCACCTATCATCGTCTCTTTAATTCTATTCTATCTATTTAACCCAATC
GTAAATATGATGGAACGTTATAGAATACCAAGAGTTGCAGGTATTTCTATTATTTATCTAGCTGTAGTAGGTGTTATTAC
GTTAATTGTTAATTTATTGATACCTATTATTGGTTCGCAAGTAGATAGTTTAGTTAAAAATTCACCGCAATATCTAGAAA
AATTAATTAATTCTATTGATAAAATAGCAAATAATACGTTTTTCTCTTCGTATTATAGTCAAATTAATGATTGGTTAAAT
TCTTTACCTAAGAAAATACCATCTATGTTAAGTGAATTTACAGATGGCTTTGGGTCTAAAATTGCAACGTTTGCAGAAAC
GATTGCTAATATTGGCGTTGTGATTGTCACAACACCATTTGTACTATTCTTTATGCTTAAAGATGGACATCACTTCAAAG
AATTTTCAACGAATATTATGCCACCGAAATTCCGAAAAGATTTTCATGATCTACTTGAAAAAATGAGTGTTCAAGTTGGT
TCATACATTCAAGGACAAATTATCGTTTCATTCTGTATCGGTATACTGTTGTTTATCGGTTATTCGGTTATCGGGTTGAA
ATATAGCTTAGTATTAGCTAGTATTGCGGCAGTTACAAGTGTTGTACCATATTTAGGGCCTACTATAGCGATTTCTCCAG
CTATTGTAATAGCTGCTATAACATCGCCGTGGATGCTCTTAAAATTAGCAGTAGTATGGACTTTAGTACAATTTGTTGAA
GGGCACTTCATTTCACCAAATATCATGGGTAAAACACTTAAGATTCATCCACTTACAATCATTTTCATTTTACTGTGTGC
AGGCAAATTGCTTGGTATTGTAGGCGTTATTTTAGGTATTCCGGGATATGCTATTTTAAAAGTATTAGTTACTCATTTAT
TCCAATTATTTAAACGTCGATACAATCGTTTCTATGGTAATGATGTAGGTGAATATGATATTAAAGAAAGTAATAAAATA
GTTGAATAA

Upstream 100 bases:

>100_bases
AAGGGTATTTGTATGGTATCATTGATGTTAGTAATTTTACATAAGTGGACTGTTTTTATACAACATCTTATGAATATTTT
AAGTGGTGGTGAATCTATAA

Downstream 100 bases:

>100_bases
GTAATAAAAAATACCAATGACTATATGTTTGTTGGTATTTTTTATGGTGCTTATAATGTTGGGCAGTTACATTTATGATT
ATCAGCACATGTTTAGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIFIFEKVSYVFDPFIIVFKTIAAPIIVSLILFYLFNPI
VNMMERYRIPRVAGISIIYLAVVGVITLIVNLLIPIIGSQVDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLN
SLPKKIPSMLSEFTDGFGSKIATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTNIMPPKFRKDFHDLLEKMSVQVG
SYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAAVTSVVPYLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVE
GHFISPNIMGKTLKIHPLTIIFILLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRRYNRFYGNDVGEYDIKESNKI
VE

Sequences:

>Translated_402_residues
MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIFIFEKVSYVFDPFIIVFKTIAAPIIVSLILFYLFNPI
VNMMERYRIPRVAGISIIYLAVVGVITLIVNLLIPIIGSQVDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLN
SLPKKIPSMLSEFTDGFGSKIATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTNIMPPKFRKDFHDLLEKMSVQVG
SYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAAVTSVVPYLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVE
GHFISPNIMGKTLKIHPLTIIFILLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRRYNRFYGNDVGEYDIKESNKI
VE
>Mature_402_residues
MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIFIFEKVSYVFDPFIIVFKTIAAPIIVSLILFYLFNPI
VNMMERYRIPRVAGISIIYLAVVGVITLIVNLLIPIIGSQVDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLN
SLPKKIPSMLSEFTDGFGSKIATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTNIMPPKFRKDFHDLLEKMSVQVG
SYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAAVTSVVPYLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVE
GHFISPNIMGKTLKIHPLTIIFILLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRRYNRFYGNDVGEYDIKESNKI
VE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=335, Percent_Identity=23.5820895522388, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87082271, Length=311, Percent_Identity=23.4726688102894, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 45075; Mature: 45075

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]