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The map label for this gene is fapR

Identifier: 15926811

GI number: 15926811

Start: 1212289

End: 1212846

Strand: Direct

Name: fapR

Synonym: SA1071

Alternate gene names: 15926811

Gene position: 1212289-1212846 (Clockwise)

Preceding gene: 15926810

Following gene: 15926812

Centisome position: 43.07

GC content: 31.54

Gene sequence:

>558_bases
TTGAAACTAAAGAAAGATAAACGTAGAGAAGCAATCAGACAACAAATTGATAGCAATCCCTTCATCACAGACCATGAACT
AAGCGACTTATTTCAAGTGAGTATACAAACAATTCGTTTAGATCGCACTTATTTAAACATACCAGAATTAAGGAAGCGTA
TTAAATTAGTTGCTGAAAAGAATTATGACCAAATAAGTTCTATTGAAGAACAAGAATTTATTGGTGATTTGATTCAAGTC
AATCCAAATGTTAAAGCGCAATCAATTTTAGATATTACATCGGATTCTGTTTTTCATAAAACTGGAATTGCGCGTGGTCA
TGTGCTGTTTGCTCAGGCAAATTCGTTATGTGTTGCGCTAATTAAGCAACCAACAGTTTTAACTCATGAGAGTAGCATTC
AATTTATTGAAAAAGTAAAATTAAATGATACGGTAAGAGCAGAAGCACGAGTTGTAAATCAAACTGCAAAACATTATTAC
GTCGAAGTAAAGTCATATGTTAAACATACATTAGTTTTCAAAGGAAATTTTAAAATGTTTTATGATAAGCGAGGATAA

Upstream 100 bases:

>100_bases
AGCTAAATAATACAGTTATTTGTTGAGTCGGTTAAATAGAAAGTGTTATGATATGTGAGGAATGTTTAAGACTAGGTACT
AAAAAATGAGGGGTGAGACG

Downstream 100 bases:

>100_bases
AATTATGGTTAAATTAGCAATTGATATGATGGGTGGCGACAATGCGCCTGATATCGTATTAGAAGCCGTACAAAAGGCTG
TTGAAGACTTTAAAAATCTA

Product: fatty acid biosynthesis transcriptional regulator

Products: NA

Alternate protein names: Fatty acid and phospholipid biosynthesis regulator

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQV
NPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYY
VEVKSYVKHTLVFKGNFKMFYDKRG

Sequences:

>Translated_185_residues
MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQV
NPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYY
VEVKSYVKHTLVFKGNFKMFYDKRG
>Mature_185_residues
MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQV
NPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYY
VEVKSYVKHTLVFKGNFKMFYDKRG

Specific function: Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fapR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FAPR_STAA1 (A7X1J2)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001441808.1
- ProteinModelPortal:   A7X1J2
- SMR:   A7X1J2
- STRING:   A7X1J2
- EnsemblBacteria:   EBSTAT00000002882
- GeneID:   5561375
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_1218
- eggNOG:   COG2050
- GeneTree:   EBGT00050000025117
- HOGENOM:   HBG304763
- OMA:   EHVFSRN
- ProtClustDB:   PRK04424
- BioCyc:   SAUR418127:SAHV_1218-MONOMER
- HAMAP:   MF_01814
- InterPro:   IPR006683
- InterPro:   IPR017275
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PIRSF:   PIRSF037733

Pfam domain/function: PF03061 4HBT

EC number: NA

Molecular weight: Translated: 21434; Mature: 21434

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEK
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCC
NYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVAL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCHHHHCCCCCCEEEEEECCCCEEHE
IKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFKMF
ECCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEE
YDKRG
EECCC
>Mature Secondary Structure
MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEK
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCC
NYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVAL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCHHHHCCCCCCEEEEEECCCCEEHE
IKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFKMF
ECCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEE
YDKRG
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA