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The map label for this gene is yfcH [C]

Identifier: 15926446

GI number: 15926446

Start: 828460

End: 829362

Strand: Reverse

Name: yfcH [C]

Synonym: SA0724

Alternate gene names: 15926446

Gene position: 829362-828460 (Counterclockwise)

Preceding gene: 15926460

Following gene: 15926425

Centisome position: 29.46

GC content: 33.78

Gene sequence:

>903_bases
ATGAAACAATACTTAATTACTGGTGGGACTGGTATGGTTGGATCTCAATTAGTTAATGAAATTAAAAAATCAGATTCACA
TATCACGATATTAACGCGACACGACCAAATTTCAAATGATAAGAAAATTTCATATGTCAACTGGGCTAAATCTGGGTGGG
AACACAAAGTTCCTCAAAATATCGATGTGGTCATCAACTTAGCAGGTGCTACACTGAATAAACGATGGACACCGGAATAT
AAACAAACGCTAATGCTAAGTAGAATTCAATCTACGCAAGCTTTATATGAATTGTTTAAATCACGTAATAAAGCACCTAA
AGTTTTATTTAATGCTAGCGCCACTGGTTACTATCCTCCTGATTTATTTATGAGTTACACAGAAGTTTATAAAACTTTAC
CATTTGATTTCTTATCAGATATTGTGTATCAATGGGAACGTTTCGCACAACAATTTGAACAATTAGGTACGCGAGTTGTC
ATCGGTCGTTTCGGTATGATTTTATCGAATGAAGGCGGTGCGTTACAAACAATGAAACTACCATACAAATATTACATTGG
TGGTAAATTAGGTTCTGGTCAACAATGGTATTCATGGATTCATATCAATGATTTAATTCAAGCTATTTTATTTTTAATAA
ATAACGAGTCAGCTAGTGGTCCGTTTAATTTAACTGCACCTATACCTGAGCGTCAAAATTTATTTGGCTACACTTTAGCA
AGAGCTATGCATAAGCCCCATGAAACTTGGGCACCAAGTCTTGCAATGCGTCTCATACTTGGTCAAATGTCAACAGTAGT
ATTGGATACTCAAAAAGTATTACCTAATAAAATTCAAGCATTGGGATTCCAATTTAAATATAGTAATTTAAAAATGGCAC
TTGAAGATTTAATCAAAGAATAA

Upstream 100 bases:

>100_bases
AGTTATTGACATATTATTGTCTAAATAATGTATAACCTTTGAACAACAATAATGATTATTAAATAGTAACTAAATACAAA
ATTACATGGGGTGAATGATA

Downstream 100 bases:

>100_bases
TCAATACCATTAATGAGCATTAGAAACAACATATGTACTAAATGTAATGTCTAGAGCGACTTACAAACAAAGGATTGAAA
TGTTCCTTTCAATGTCTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKISYVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEY
KQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVV
IGRFGMILSNEGGALQTMKLPYKYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLA
RAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLIKE

Sequences:

>Translated_300_residues
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKISYVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEY
KQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVV
IGRFGMILSNEGGALQTMKLPYKYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLA
RAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLIKE
>Mature_300_residues
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKISYVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEY
KQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVV
IGRFGMILSNEGGALQTMKLPYKYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLA
RAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLIKE

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=300, Percent_Identity=30, Blast_Score=148, Evalue=5e-36,
Organism=Escherichia coli, GI1788642, Length=300, Percent_Identity=36.3333333333333, Blast_Score=202, Evalue=3e-53,
Organism=Drosophila melanogaster, GI28573846, Length=302, Percent_Identity=32.1192052980132, Blast_Score=159, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34273; Mature: 34273

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKISYVNWAKSGWEHKVPQN
CCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEHHHCCCCCCCCCC
IDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYYPP
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCH
DLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFGMILSNEGGALQTMKL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCCCEEEEEC
PYKYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLA
CEEEEECCCCCCCHHHHEEEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHH
RAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLIKE
HHHHCCCHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHCEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKISYVNWAKSGWEHKVPQN
CCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEHHHCCCCCCCCCC
IDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYYPP
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCH
DLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFGMILSNEGGALQTMKL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCCCEEEEEC
PYKYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLA
CEEEEECCCCCCCHHHHEEEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHH
RAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLIKE
HHHHCCCHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHCEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA