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The map label for this gene is yciC [H]

Identifier: 15926128

GI number: 15926128

Start: 468137

End: 469339

Strand: Direct

Name: yciC [H]

Synonym: SA0410

Alternate gene names: 15926128

Gene position: 468137-469339 (Clockwise)

Preceding gene: 15926126

Following gene: 15926130

Centisome position: 16.63

GC content: 36.24

Gene sequence:

>1203_bases
ATGGCTAAAATTCCAGTTACGGTATTAAGTGGTTATTTAGGCTCGGGGAAAACAACATTGTTAAATCATATTTTACAAAA
TCGTGAAGGTCGACGTATCGCGGTAATTGTAAATGATATGAGTGAAGTTAATATCGATAAAGATCTTGTCGCAGATGGTG
GGGGACTATCGCGTACAGATGAAAAATTAGTCGAACTCTCTAATGGTTGTATCTGTTGTACACTTAGAGATGATTTATTA
AAAGAAGTTGAGCGTTTAGTGAAAAAAGGTGGCATCGATCAAATTGTTATTGAGTCAACAGGGATTTCAGAGCCAGTACC
TGTTGCACAAACTTTCTCATATATTGATGATGAACTTGGCATTGATCTTACAGCGATTTGCCGTTTAGATACAATGGTTA
CAGTTGTTGATGCTAACCGCTTCGTACATGACATCAACTCAGAAGATTTATTGATGGATCGTGATCAAAGCGTTGATGAA
ACAGATGAACGTTCGATTGCTGATTTATTAATTGACCAAGTTGAATTTTGTGATGTATTGATTATTAATAAAATTGATTT
AATTAGTGAAGAAGAACTTGCAAAGTTAGAAAAAGTGTTAAGCGCATTGCAACCTATTGCTAAAATTATTAAGACAACAA
ATTCTGAAGTAGATTTAAAAGAAGTCTTAAATACGCAGCGTTTTGATTTTGAAAAAGCGAGCGAGTCAGCAGGATGGATC
AAAGAACTTGAGTCGGGTGGTCATGCATCGCATACGCCTGAAACAGAAGAATATGGCATATCATCATTTGTATATAAACG
TCGTCTACCTTTCCATGCTAAAAGGTTCAATGATTGGTTAGAAAGCATGTCAAATAATGTCGTTCGATCAAAAGGTATCG
TATGGTTAGCACAATACAATCATGTAGCATGTTTATTATCTCAAGCAGGGTCATCTTGCAATATTCACCCAGTTACATAT
TGGGTGGCTAGTATGTCTGAAGCGCAACAAACACAAATATTAGCAGAACGTCAAGATGTCGCAGCTGAATGGGATCCAGA
ATATGGCGATCGTCATACACAATTTGTCATTATTGGTACAGAATTAGATGAAGAAAAATTAACAAAAGAACTCGATGCAT
GCTTAGTCAATGCGCAAGAAATTGATGCAGATTGGCAACAATTTGAAGATCCATATCAATGGCAAATTAGACCAGCACGA
TAA

Upstream 100 bases:

>100_bases
TATTTTTTTATTATCGAAGATTGCGAAAGAGGAAACGCTCCTATATAATGTAAAACGGAATTATTCCTATTTACAAATAA
ATTGAAGTGAGGGTATATAT

Downstream 100 bases:

>100_bases
GTTGAATGAAGTATAATCATTTTTGAATTGTGGCTTAATTGTTTGCAATTTATGACAATTAATAAAAAGTTAAGATGTTC
TTAGGAACTTTTTGTTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTDEKLVELSNGCICCTLRDDLL
KEVERLVKKGGIDQIVIESTGISEPVPVAQTFSYIDDELGIDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDE
TDERSIADLLIDQVEFCDVLIINKIDLISEEELAKLEKVLSALQPIAKIIKTTNSEVDLKEVLNTQRFDFEKASESAGWI
KELESGGHASHTPETEEYGISSFVYKRRLPFHAKRFNDWLESMSNNVVRSKGIVWLAQYNHVACLLSQAGSSCNIHPVTY
WVASMSEAQQTQILAERQDVAAEWDPEYGDRHTQFVIIGTELDEEKLTKELDACLVNAQEIDADWQQFEDPYQWQIRPAR

Sequences:

>Translated_400_residues
MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTDEKLVELSNGCICCTLRDDLL
KEVERLVKKGGIDQIVIESTGISEPVPVAQTFSYIDDELGIDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDE
TDERSIADLLIDQVEFCDVLIINKIDLISEEELAKLEKVLSALQPIAKIIKTTNSEVDLKEVLNTQRFDFEKASESAGWI
KELESGGHASHTPETEEYGISSFVYKRRLPFHAKRFNDWLESMSNNVVRSKGIVWLAQYNHVACLLSQAGSSCNIHPVTY
WVASMSEAQQTQILAERQDVAAEWDPEYGDRHTQFVIIGTELDEEKLTKELDACLVNAQEIDADWQQFEDPYQWQIRPAR
>Mature_399_residues
AKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTDEKLVELSNGCICCTLRDDLLK
EVERLVKKGGIDQIVIESTGISEPVPVAQTFSYIDDELGIDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDET
DERSIADLLIDQVEFCDVLIINKIDLISEEELAKLEKVLSALQPIAKIIKTTNSEVDLKEVLNTQRFDFEKASESAGWIK
ELESGGHASHTPETEEYGISSFVYKRRLPFHAKRFNDWLESMSNNVVRSKGIVWLAQYNHVACLLSQAGSSCNIHPVTYW
VASMSEAQQTQILAERQDVAAEWDPEYGDRHTQFVIIGTELDEEKLTKELDACLVNAQEIDADWQQFEDPYQWQIRPAR

Specific function: May bind GTP. Might act as metal chaperone (Potential). Contributes to optimal growth under starvation for zinc [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI146231952, Length=230, Percent_Identity=38.695652173913, Blast_Score=151, Evalue=8e-37,
Organism=Homo sapiens, GI148727351, Length=230, Percent_Identity=38.2608695652174, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI33469141, Length=230, Percent_Identity=38.2608695652174, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI126722884, Length=230, Percent_Identity=38.2608695652174, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI223941779, Length=229, Percent_Identity=37.117903930131, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI223941776, Length=218, Percent_Identity=36.2385321100917, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI119120938, Length=149, Percent_Identity=42.2818791946309, Blast_Score=117, Evalue=2e-26,
Organism=Escherichia coli, GI87082430, Length=381, Percent_Identity=27.2965879265092, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788499, Length=234, Percent_Identity=27.3504273504274, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6324356, Length=238, Percent_Identity=29.8319327731092, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 45018; Mature: 44887

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTD
CCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHCCCCHHHHCCCCCCCHHH
EKLVELSNGCICCTLRDDLLKEVERLVKKGGIDQIVIESTGISEPVPVAQTFSYIDDELG
HHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHC
IDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDETDERSIADLLIDQVEFCDVL
CCHHHHHHHHHEEEEEECHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
IINKIDLISEEELAKLEKVLSALQPIAKIIKTTNSEVDLKEVLNTQRFDFEKASESAGWI
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHCCCHHHH
KELESGGHASHTPETEEYGISSFVYKRRLPFHAKRFNDWLESMSNNVVRSKGIVWLAQYN
HHHHCCCCCCCCCCHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECC
HVACLLSQAGSSCNIHPVTYWVASMSEAQQTQILAERQDVAAEWDPEYGDRHTQFVIIGT
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC
ELDEEKLTKELDACLVNAQEIDADWQQFEDPYQWQIRPAR
CCCHHHHHHHHHHHHHCHHHCCCCHHHCCCCCEEEEEECC
>Mature Secondary Structure 
AKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTD
CCCCHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHCCCCHHHHCCCCCCCHHH
EKLVELSNGCICCTLRDDLLKEVERLVKKGGIDQIVIESTGISEPVPVAQTFSYIDDELG
HHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHC
IDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDETDERSIADLLIDQVEFCDVL
CCHHHHHHHHHEEEEEECHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
IINKIDLISEEELAKLEKVLSALQPIAKIIKTTNSEVDLKEVLNTQRFDFEKASESAGWI
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHCCCHHHH
KELESGGHASHTPETEEYGISSFVYKRRLPFHAKRFNDWLESMSNNVVRSKGIVWLAQYN
HHHHCCCCCCCCCCHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECC
HVACLLSQAGSSCNIHPVTYWVASMSEAQQTQILAERQDVAAEWDPEYGDRHTQFVIIGT
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC
ELDEEKLTKELDACLVNAQEIDADWQQFEDPYQWQIRPAR
CCCHHHHHHHHHHHHHCHHHCCCCHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 9811636 [H]