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The map label for this gene is 15926054

Identifier: 15926054

GI number: 15926054

Start: 397444

End: 398577

Strand: Reverse

Name: 15926054

Synonym: SA0341

Alternate gene names: NA

Gene position: 398577-397444 (Counterclockwise)

Preceding gene: 15926056

Following gene: 15926049

Centisome position: 14.16

GC content: 31.75

Gene sequence:

>1134_bases
ATGGTTAATGCATTAACACCAAAACATTTAGCTGAAAAGCGTGCAGGATTCCATGAGTTGTTCTTTGATTTAATTTTCGT
CTATGCCATTCAAAAAATTGCACATGTGATTTTAACAACACAAAACGGTTCCATTTCAGCTGATTTATTTTTCAAATACA
TCGTCATGAGTTTGTTCTTATGGTTAATGTGGTCTCATCAAACATTTTTTACAAATCGATTTGGTCAAGTTACATTCAAA
GACGTCTCGTTTATGATGTTTAATATGTTCATCATGGTCTTCCTATCTAACAGCCTATATCCGGACTTTGAAAAGACATT
CTTCCCATTCTTCTTATGCGTGGCAATTATGTATTTAAGTATCGGATTACAGTATTTATTACATATACGTACAGGGTTAG
ATTATGGCGATAAGCGTACATGTCAAGCTTTTGCGAGCGTAGCCTTTGTGATTTCATTTTTATCATTTCTATCATTAGTA
CTACCACAAAGTATCCATTACATCCCTGGATTTTTAGGCGTATTCATTGCAGCGACAGGACTTATTCCATTTCAGAAATA
TCTTGTATTATCACCTGTTAATATGATGCATTTAGTAGAACGTTTTTCGTTACTAACAATTATTATCTTTGGCGAGGTAC
TGGTTGGTTTAGCTTCGTCATCATTTAGCATTGATCATTTTAGTTACATTTATATATTCCAATTTATGATTTTAATTAGT
CTTTTCGGTGTATATTGGATCATTACTGAAAATTACATTAATCATAAATTGTCATCTATCGGTTTCCGTTTATCGTATAC
GCATCTATTAATCAATATCGCTTTAGGTGTGATTAATGCTGCAATTGTTTTTAGTAATAACAATAAACTAAATGACTTGT
TTGAAATTAATATGATGTATATCAGTGTTTTAATATTCTATATTGGATTATGGTTAATCACGCCTTATTTCCATAATGAA
CTGACAAACGCAAAATATATTTCTTCTTCACTAGGCATACTTGTAGTATCATATATCATCAGCCTTATCTTTAAGGGGCA
TGACCAAGTAATGATTATCTCGGTATCCGTTGCGACTTTCTGCATCATGCTGATTTATTTTAAAAATCAACGTCTACGTA
ATAAACATGAATAA

Upstream 100 bases:

>100_bases
CTCTCCTTCCACTTCATCGCCAAATCTGCCCCTATTCACTAGAAAAAATAAATAGTATACTTAGTAAATTAATTACACAT
CTTAAAGGAGTTAAAATTTT

Downstream 100 bases:

>100_bases
ATAGTATTCACCTCGGTCAAAGTATTTGAACTGAATCCAAAAGTGTCGAACTTCACATTATACTTTTGGATTCAGTTATG
CTACATGATCGAGGTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Low Temperature Requirement Protein LtrA; Low Temperature Requirement A; Bacterial Low Temperature Requirement A

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MVNALTPKHLAEKRAGFHELFFDLIFVYAIQKIAHVILTTQNGSISADLFFKYIVMSLFLWLMWSHQTFFTNRFGQVTFK
DVSFMMFNMFIMVFLSNSLYPDFEKTFFPFFLCVAIMYLSIGLQYLLHIRTGLDYGDKRTCQAFASVAFVISFLSFLSLV
LPQSIHYIPGFLGVFIAATGLIPFQKYLVLSPVNMMHLVERFSLLTIIIFGEVLVGLASSSFSIDHFSYIYIFQFMILIS
LFGVYWIITENYINHKLSSIGFRLSYTHLLINIALGVINAAIVFSNNNKLNDLFEINMMYISVLIFYIGLWLITPYFHNE
LTNAKYISSSLGILVVSYIISLIFKGHDQVMIISVSVATFCIMLIYFKNQRLRNKHE

Sequences:

>Translated_377_residues
MVNALTPKHLAEKRAGFHELFFDLIFVYAIQKIAHVILTTQNGSISADLFFKYIVMSLFLWLMWSHQTFFTNRFGQVTFK
DVSFMMFNMFIMVFLSNSLYPDFEKTFFPFFLCVAIMYLSIGLQYLLHIRTGLDYGDKRTCQAFASVAFVISFLSFLSLV
LPQSIHYIPGFLGVFIAATGLIPFQKYLVLSPVNMMHLVERFSLLTIIIFGEVLVGLASSSFSIDHFSYIYIFQFMILIS
LFGVYWIITENYINHKLSSIGFRLSYTHLLINIALGVINAAIVFSNNNKLNDLFEINMMYISVLIFYIGLWLITPYFHNE
LTNAKYISSSLGILVVSYIISLIFKGHDQVMIISVSVATFCIMLIYFKNQRLRNKHE
>Mature_377_residues
MVNALTPKHLAEKRAGFHELFFDLIFVYAIQKIAHVILTTQNGSISADLFFKYIVMSLFLWLMWSHQTFFTNRFGQVTFK
DVSFMMFNMFIMVFLSNSLYPDFEKTFFPFFLCVAIMYLSIGLQYLLHIRTGLDYGDKRTCQAFASVAFVISFLSFLSLV
LPQSIHYIPGFLGVFIAATGLIPFQKYLVLSPVNMMHLVERFSLLTIIIFGEVLVGLASSSFSIDHFSYIYIFQFMILIS
LFGVYWIITENYINHKLSSIGFRLSYTHLLINIALGVINAAIVFSNNNKLNDLFEINMMYISVLIFYIGLWLITPYFHNE
LTNAKYISSSLGILVVSYIISLIFKGHDQVMIISVSVATFCIMLIYFKNQRLRNKHE

Specific function: Unknown

COG id: COG4292

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43543; Mature: 43543

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCHHHCCCCC
>Mature Secondary Structure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HHHHHHHHCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA