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The map label for this gene is ygzD [H]

Identifier: 15926050

GI number: 15926050

Start: 394648

End: 394851

Strand: Direct

Name: ygzD [H]

Synonym: SA0337

Alternate gene names: 15926050

Gene position: 394648-394851 (Clockwise)

Preceding gene: 15926046

Following gene: 15926051

Centisome position: 14.02

GC content: 39.71

Gene sequence:

>204_bases
GTGCGTAATCGATTGAAAGAGTTACGAGCACGAGATGGCTTAAATCAAACGCAGCTTGCCAAACTAGCTGGTGTTTCAAG
ACAAACCATTTCGCTAATTGAGCGAAACAATTTTATGCCATCAGTATTAACGGCAATAAAGATTGCTCGCATTTTCAATG
AAACGGTGGAAACGGTTTTTATTATTGAGGAGGATGAAGCATGA

Upstream 100 bases:

>100_bases
ATACATAGGTGGACAATCATATTTTTTTGTGTAGATTTGACAAATATAGTTGTCAAAAAGACAAATATCATTTACATTAG
GACTAAGGAGTTGATGCGAT

Downstream 100 bases:

>100_bases
AAATACTAAGATATATCGGATATCTTTTACTGGGTGGAATTGTAGGGGGTATCATTGGTGGAATTTTAGGTAACTTTGAT
GGATTGGGTATTGAGAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MRNRLKELRARDGLNQTQLAKLAGVSRQTISLIERNNFMPSVLTAIKIARIFNETVETVFIIEEDEA

Sequences:

>Translated_67_residues
MRNRLKELRARDGLNQTQLAKLAGVSRQTISLIERNNFMPSVLTAIKIARIFNETVETVFIIEEDEA
>Mature_67_residues
MRNRLKELRARDGLNQTQLAKLAGVSRQTISLIERNNFMPSVLTAIKIARIFNETVETVFIIEEDEA

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7674; Mature: 7674

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRLKELRARDGLNQTQLAKLAGVSRQTISLIERNNFMPSVLTAIKIARIFNETVETVF
CCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEE
IIEEDEA
EEECCCC
>Mature Secondary Structure
MRNRLKELRARDGLNQTQLAKLAGVSRQTISLIERNNFMPSVLTAIKIARIFNETVETVF
CCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEE
IIEEDEA
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]