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The map label for this gene is ykpA [H]

Identifier: 15675942

GI number: 15675942

Start: 1843354

End: 1844973

Strand: Direct

Name: ykpA [H]

Synonym: SPy_2210

Alternate gene names: 15675942

Gene position: 1843354-1844973 (Clockwise)

Preceding gene: 15675941

Following gene: 15675943

Centisome position: 99.51

GC content: 37.72

Gene sequence:

>1620_bases
TTGCTTACAGTTTCTGATGTATCACTACGCTTTAGTGATCGAAAACTATTTGATGATGTTAATATCAAATTCACAGCCGG
CAATACTTACGGCTTAATCGGTGCCAATGGTGCCGGAAAATCAACTTTTCTTAAAATCCTTGCAGGAGATATTGAACCAA
GTACTGGTCATATCTCTTTAGGACCTGACGAACGCTTATCTGTTCTTCGCCAAAATCATTTTGATTATGAAGAAGAACGT
GCGATTGATGTTGTAATCATGGGTAATGAACAACTCTACAATATCATGAAAGAAAAAGACGCTATCTATATGAAAGCAGA
TTTTTCAGAAGAAGATGGGGTTCGTGCCGCTGAGCTAGAAGGTATCTTTGCTGAATTAGGTGGCTGGGAGGCAGAAAGTG
AAGCTTCTCAACTTCTCCAAAATCTAAATATTCCAGAAGACCTTCACTACCAAAATATGAGTGAACTGGCTAATGGAGAT
AAAGTGAAAGTCCTTCTTGCTAAAGCGCTCTTTGGTAAGCCTGACGTTTTATTACTTGACGAGCCAACCAATGGTCTTGA
TATTCAATCTATTTCATGGTTGGAAGATTTCTTGATTGATTTTGAAAATACAGTCATCGTTGTTTCCCATGACCGTCACT
TCTTGAATAAAGTATGTACTCACATGGCCGACCTTGACTTTGGTAAAATCAAACTCTTTGTGGGTAACTACGATTTCTGG
AAACAATCTTCTGAGCTGGCCGCTCGTTTACAAGCTGACCGCAATGCTAAAGCAGAAGAGAAAATCAAAGAATTACAAGA
ATTCGTTGCCCGTTTCTCAGCAAACGCATCTAAATCAAAACAAGCAACCTCTCGTAAAAAAATGCTTGATAAGATTGAAT
TAGAAGAAATTGTTCCCTCAAGCCGTAAATACCCATTTATTAATTTTAAAGCAGAGCGTGAAATGGGAAATGACTTCCTC
ACTGTTGAAAATCTTTCTGTAACGATCGATGGAGAGAAAATCATTGATAATATCAGTTTCATTTTACGTCCAGGTGACAA
AGCTGCTATTATTGGTCAAAATGATATTCAGACAACTGCTCTTATGCGTGCTTTAGCAGATGATATTGACTACGAAGGAA
CCATTAAATGGGGAGTGACAACAAGTCGTTCTTACTTGCCTAAAGACAATTCAAAAGATTTTGCCACGGAAGAATCTATT
CTTGAATGGTTACGTCAATTTGCCTCAAAAGGTGAAGATGATGATACCTTTTTACGTGGGTTCTTAGGACGGATGCTTTT
CTCTGGAGACGAAGTTAAAAAATCTGTTAACGTTCTTTCCGGTGGCGAAAAAGTGCGTGTCATGCTTTCTAAGTTGATGC
TATTGAAATCAAACGTTCTTATTCTTGATGACCCAACTAATCACTTAGATTTGGAATCTATTTCAAGTCTTAATGATGGA
ATCAAAGACTTCAAAGAATCTGTTATCTTTGCCAGTCATGACCATGAATTTATTCAAACGATTGCTAACCACATCGTTGT
TATTTCAAAAAATGGTGTTATCGACCGTATAGATGAAACTTATGACGAATTCCTTGACAATCCAGAAGTCCAAGCCCGAG
TTGCTGAACTTTGGAAATAA

Upstream 100 bases:

>100_bases
AGACGTTTTATTGCCTATGTAGTGATTAGCCCTTTTCTGATTGAAAAAGGGGACTATTTTAGGTACAATGAAGCTTAGAT
AAATAAAATGAGGTGACAAA

Downstream 100 bases:

>100_bases
AACCTTATGATAAATGAGGTGGCTAAGAAGATCTCTTCCTAGCCTCTTTTTTAAAATTTGTAAACGAAAGACCATATAAT
TTATGAAAAATAATAATAAA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MLTVSDVSLRFSDRKLFDDVNIKFTAGNTYGLIGANGAGKSTFLKILAGDIEPSTGHISLGPDERLSVLRQNHFDYEEER
AIDVVIMGNEQLYNIMKEKDAIYMKADFSEEDGVRAAELEGIFAELGGWEAESEASQLLQNLNIPEDLHYQNMSELANGD
KVKVLLAKALFGKPDVLLLDEPTNGLDIQSISWLEDFLIDFENTVIVVSHDRHFLNKVCTHMADLDFGKIKLFVGNYDFW
KQSSELAARLQADRNAKAEEKIKELQEFVARFSANASKSKQATSRKKMLDKIELEEIVPSSRKYPFINFKAEREMGNDFL
TVENLSVTIDGEKIIDNISFILRPGDKAAIIGQNDIQTTALMRALADDIDYEGTIKWGVTTSRSYLPKDNSKDFATEESI
LEWLRQFASKGEDDDTFLRGFLGRMLFSGDEVKKSVNVLSGGEKVRVMLSKLMLLKSNVLILDDPTNHLDLESISSLNDG
IKDFKESVIFASHDHEFIQTIANHIVVISKNGVIDRIDETYDEFLDNPEVQARVAELWK

Sequences:

>Translated_539_residues
MLTVSDVSLRFSDRKLFDDVNIKFTAGNTYGLIGANGAGKSTFLKILAGDIEPSTGHISLGPDERLSVLRQNHFDYEEER
AIDVVIMGNEQLYNIMKEKDAIYMKADFSEEDGVRAAELEGIFAELGGWEAESEASQLLQNLNIPEDLHYQNMSELANGD
KVKVLLAKALFGKPDVLLLDEPTNGLDIQSISWLEDFLIDFENTVIVVSHDRHFLNKVCTHMADLDFGKIKLFVGNYDFW
KQSSELAARLQADRNAKAEEKIKELQEFVARFSANASKSKQATSRKKMLDKIELEEIVPSSRKYPFINFKAEREMGNDFL
TVENLSVTIDGEKIIDNISFILRPGDKAAIIGQNDIQTTALMRALADDIDYEGTIKWGVTTSRSYLPKDNSKDFATEESI
LEWLRQFASKGEDDDTFLRGFLGRMLFSGDEVKKSVNVLSGGEKVRVMLSKLMLLKSNVLILDDPTNHLDLESISSLNDG
IKDFKESVIFASHDHEFIQTIANHIVVISKNGVIDRIDETYDEFLDNPEVQARVAELWK
>Mature_539_residues
MLTVSDVSLRFSDRKLFDDVNIKFTAGNTYGLIGANGAGKSTFLKILAGDIEPSTGHISLGPDERLSVLRQNHFDYEEER
AIDVVIMGNEQLYNIMKEKDAIYMKADFSEEDGVRAAELEGIFAELGGWEAESEASQLLQNLNIPEDLHYQNMSELANGD
KVKVLLAKALFGKPDVLLLDEPTNGLDIQSISWLEDFLIDFENTVIVVSHDRHFLNKVCTHMADLDFGKIKLFVGNYDFW
KQSSELAARLQADRNAKAEEKIKELQEFVARFSANASKSKQATSRKKMLDKIELEEIVPSSRKYPFINFKAEREMGNDFL
TVENLSVTIDGEKIIDNISFILRPGDKAAIIGQNDIQTTALMRALADDIDYEGTIKWGVTTSRSYLPKDNSKDFATEESI
LEWLRQFASKGEDDDTFLRGFLGRMLFSGDEVKKSVNVLSGGEKVRVMLSKLMLLKSNVLILDDPTNHLDLESISSLNDG
IKDFKESVIFASHDHEFIQTIANHIVVISKNGVIDRIDETYDEFLDNPEVQARVAELWK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=29.9625468164794, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI27881506, Length=528, Percent_Identity=28.9772727272727, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI10947137, Length=528, Percent_Identity=28.9772727272727, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI10947135, Length=552, Percent_Identity=26.268115942029, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI69354671, Length=552, Percent_Identity=26.268115942029, Blast_Score=169, Evalue=7e-42,
Organism=Homo sapiens, GI30795238, Length=221, Percent_Identity=28.9592760180996, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI27881501, Length=221, Percent_Identity=28.9592760180996, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI153792144, Length=305, Percent_Identity=25.9016393442623, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1787041, Length=527, Percent_Identity=47.0588235294118, Blast_Score=512, Evalue=1e-146,
Organism=Escherichia coli, GI1789751, Length=536, Percent_Identity=29.4776119402985, Blast_Score=242, Evalue=4e-65,
Organism=Escherichia coli, GI2367384, Length=535, Percent_Identity=30.0934579439252, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI1787182, Length=527, Percent_Identity=29.0322580645161, Blast_Score=198, Evalue=6e-52,
Organism=Escherichia coli, GI1786703, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788450, Length=305, Percent_Identity=26.2295081967213, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1786398, Length=223, Percent_Identity=24.6636771300448, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=23, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081782, Length=210, Percent_Identity=27.6190476190476, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=22.8699551569507, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1788644, Length=255, Percent_Identity=25.8823529411765, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=541, Percent_Identity=28.6506469500924, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17555318, Length=522, Percent_Identity=27.5862068965517, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17559834, Length=529, Percent_Identity=25.7088846880907, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI115533608, Length=238, Percent_Identity=27.7310924369748, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6320874, Length=525, Percent_Identity=32, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=26.3837638376384, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6325030, Length=238, Percent_Identity=31.9327731092437, Blast_Score=106, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=250, Percent_Identity=27.2, Blast_Score=90, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6323278, Length=265, Percent_Identity=25.6603773584906, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24666836, Length=535, Percent_Identity=28.2242990654206, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24642252, Length=553, Percent_Identity=27.124773960217, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI18859989, Length=553, Percent_Identity=27.124773960217, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24641342, Length=547, Percent_Identity=27.2394881170018, Blast_Score=191, Evalue=9e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60734; Mature: 60734

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVSDVSLRFSDRKLFDDVNIKFTAGNTYGLIGANGAGKSTFLKILAGDIEPSTGHISL
CEEEECEEEEECCCHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEC
GPDERLSVLRQNHFDYEEERAIDVVIMGNEQLYNIMKEKDAIYMKADFSEEDGVRAAELE
CCHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHCCEEEEEECCCCCCCCCHHHHH
GIFAELGGWEAESEASQLLQNLNIPEDLHYQNMSELANGDKVKVLLAKALFGKPDVLLLD
HHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCHHHHCCCCEEEEEEEHHHCCCCCEEEEE
EPTNGLDIQSISWLEDFLIDFENTVIVVSHDRHFLNKVCTHMADLDFGKIKLFVGNYDFW
CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
KQSSELAARLQADRNAKAEEKIKELQEFVARFSANASKSKQATSRKKMLDKIELEEIVPS
HCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SRKYPFINFKAEREMGNDFLTVENLSVTIDGEKIIDNISFILRPGDKAAIIGQNDIQTTA
CCCCCEEEEEEHHHCCCCEEEEEEEEEEECHHHHHCCCCEEEECCCCEEEECCCCHHHHH
LMRALADDIDYEGTIKWGVTTSRSYLPKDNSKDFATEESILEWLRQFASKGEDDDTFLRG
HHHHHHHCCCCCCEEEECEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
FLGRMLFSGDEVKKSVNVLSGGEKVRVMLSKLMLLKSNVLILDDPTNHLDLESISSLNDG
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHH
IKDFKESVIFASHDHEFIQTIANHIVVISKNGVIDRIDETYDEFLDNPEVQARVAELWK
HHHHHHHEEEECCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MLTVSDVSLRFSDRKLFDDVNIKFTAGNTYGLIGANGAGKSTFLKILAGDIEPSTGHISL
CEEEECEEEEECCCHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEC
GPDERLSVLRQNHFDYEEERAIDVVIMGNEQLYNIMKEKDAIYMKADFSEEDGVRAAELE
CCHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHCCEEEEEECCCCCCCCCHHHHH
GIFAELGGWEAESEASQLLQNLNIPEDLHYQNMSELANGDKVKVLLAKALFGKPDVLLLD
HHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCHHHHCCCCEEEEEEEHHHCCCCCEEEEE
EPTNGLDIQSISWLEDFLIDFENTVIVVSHDRHFLNKVCTHMADLDFGKIKLFVGNYDFW
CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCHHH
KQSSELAARLQADRNAKAEEKIKELQEFVARFSANASKSKQATSRKKMLDKIELEEIVPS
HCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SRKYPFINFKAEREMGNDFLTVENLSVTIDGEKIIDNISFILRPGDKAAIIGQNDIQTTA
CCCCCEEEEEEHHHCCCCEEEEEEEEEEECHHHHHCCCCEEEECCCCEEEECCCCHHHHH
LMRALADDIDYEGTIKWGVTTSRSYLPKDNSKDFATEESILEWLRQFASKGEDDDTFLRG
HHHHHHHCCCCCCEEEECEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
FLGRMLFSGDEVKKSVNVLSGGEKVRVMLSKLMLLKSNVLILDDPTNHLDLESISSLNDG
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHH
IKDFKESVIFASHDHEFIQTIANHIVVISKNGVIDRIDETYDEFLDNPEVQARVAELWK
HHHHHHHEEEECCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]