Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
---|---|
Accession | NC_002737 |
Length | 1,852,441 |
Click here to switch to the map view.
The map label for this gene is cadC [H]
Identifier: 15675903
GI number: 15675903
Start: 1800352
End: 1800690
Strand: Direct
Name: cadC [H]
Synonym: SPy_2163
Alternate gene names: 15675903
Gene position: 1800352-1800690 (Clockwise)
Preceding gene: 15675902
Following gene: 15675904
Centisome position: 97.19
GC content: 32.74
Gene sequence:
>339_bases ATGAAAAAAGATAGTATCTGTCAAGTGGGTGTTATAAATCAACAAAATGTTACAACCGCAACGAACTACCTTGAAAAGGA AAAAGTCCAAAAATCACTTCGTATTTTATCAAAATTTACCGATAATAAACAGATAAATATCATCTTTTATCTCCTTGCCG TCGAAGAACTCTGTGTCTGCGATATAGCCTGTTTATTAAATCTCAGTATGGCATCTGCCTCCCACCATCTTCGTAAACTA GCCAATCAAAACATCTTGGACACTAGAAGAGAGGGGAAAATTATATATTATTTTATAAAAGATGAGGAAATCAGAGATTT TTTTAATCAACTAGGATAA
Upstream 100 bases:
>100_bases GGTTTATTGCCGTTGTTTATTTAGGATTGGGGATGTATATCCTGATTGAAAACAACAGCTTTGACATGCTATGGGCTGTG TTAGGCTAGGAGAAAAAATT
Downstream 100 bases:
>100_bases CAACTATTTTTACTACTTTCTACTTTTCCATGATTATAGGGGGATTATATATGAAATTTTTTGAAGAAAATTATTCACAA GAAATACCTACTCGTATCAA
Product: putative cadmium efflux system accessory
Products: NA
Alternate protein names: Cadmium resistance regulatory protein [H]
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKKDSICQVGVINQQNVTTATNYLEKEKVQKSLRILSKFTDNKQINIIFYLLAVEELCVCDIACLLNLSMASASHHLRKL ANQNILDTRREGKIIYYFIKDEEIRDFFNQLG
Sequences:
>Translated_112_residues MKKDSICQVGVINQQNVTTATNYLEKEKVQKSLRILSKFTDNKQINIIFYLLAVEELCVCDIACLLNLSMASASHHLRKL ANQNILDTRREGKIIYYFIKDEEIRDFFNQLG >Mature_112_residues MKKDSICQVGVINQQNVTTATNYLEKEKVQKSLRILSKFTDNKQINIIFYLLAVEELCVCDIACLLNLSMASASHHLRKL ANQNILDTRREGKIIYYFIKDEEIRDFFNQLG
Specific function: Metal-binding repressor for the cad operon. Involved in resistance to heavy metals, such as cadmium, bismuth, zinc or lead. Metal binding causes the repressor to dissociate from the DNA [H]
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR018334 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 12986; Mature: 12986
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS00846 HTH_ARSR_1 ; PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDSICQVGVINQQNVTTATNYLEKEKVQKSLRILSKFTDNKQINIIFYLLAVEELCVC CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH DIACLLNLSMASASHHLRKLANQNILDTRREGKIIYYFIKDEEIRDFFNQLG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHCC >Mature Secondary Structure MKKDSICQVGVINQQNVTTATNYLEKEKVQKSLRILSKFTDNKQINIIFYLLAVEELCVC CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH DIACLLNLSMASASHHLRKLANQNILDTRREGKIIYYFIKDEEIRDFFNQLG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8188605; 8188606 [H]