Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ypjC [H]
Identifier: 15675896
GI number: 15675896
Start: 1793669
End: 1794547
Strand: Reverse
Name: ypjC [H]
Synonym: SPy_2154
Alternate gene names: 15675896
Gene position: 1794547-1793669 (Counterclockwise)
Preceding gene: 15675897
Following gene: 15675895
Centisome position: 96.87
GC content: 38.68
Gene sequence:
>879_bases ATGTCAATTGACCAACGTTTACAGTTAAAGAAATTTTGCTTTATTATTTTAGGAGCTGCTATCTACGCCTTTGCTTTTGT TTATTTTTACATGGCTAATCGCATTGCAGCCAATGGTTTAGCTGGTCTCACCCTAGTTGGTAAGGCACTTTTTGAGATTG ATCCTTCTTTGATAGGCTATTTGATTAATTTGCCTTTGGTCTTGCTGGGAGCTAGATGTTTTGGGAAAAGAGCCATGGTT TACACAGTAACGGGTATTTTATCACTTTACTTTTTTGTGTGGCTGTTTCAACGCTTTCCTTTGGTCGTTGACTTGGACCA TGACAATTTAGTCGTTTCCTTGATGGCTGGAATTATTGGTGGTCTAGGTGGCGGTCTTGTGTTTCGCAATGGTGGAACCA TCGGTGGAGCAGATATTATTGCTAAGTTATTAGAAGACAAGTTAGGACTACAGCTGAATCAAGCTCTTTTAGGCATTGAT CTTTTTGTCATGATTGTCTCTTTGACTTATATTTCCCTGCCGCAAATGATGTATGCTCTGATTGCTAGCTTTATGTATGG TCAAATTGTTCGCTTGGTACAACAAGGTGGTTATTCAGCCCGTGGCATTTTTATCGTTTCAGAACAAGCGGAGAAAATTG CCCGGTTCATCATGGACGAATTGGGAAGAGGAGTTACTTATCTAACAGGTGAAGGAGCCTACTCTGGTCGCCGTAAAAAA GTGATTTATGTGGCTTTGGGGCGAAGAGATATTAGGGAATTAAAAGCTTTTTTAACTCAGGTTGATCCCAATGCCTTTAT CACTTATTTTGATGTTAATGAAGTCAATAGCCCAGAATTTTTAACTATTAAAAGCAAATACCATAAAAAGAGAAAATAA
Upstream 100 bases:
>100_bases ATGTTAAAAACAGACCCACAAGCCTTTGTTTCAGTGGCTGAGAATGTTAGAATTATCGGTCGTTTTGTGGAAGATGATTA AGAAAAACACAGGAGGTGTC
Downstream 100 bases:
>100_bases ATGAGCATTAGAGTTGCCTGCGAAGAATAGTGAGGATAAAGGATGGCACATCACGATAAATTGACTAAACTACTAAAACT GTTTTTGATTGCCCTAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSIDQRLQLKKFCFIILGAAIYAFAFVYFYMANRIAANGLAGLTLVGKALFEIDPSLIGYLINLPLVLLGARCFGKRAMV YTVTGILSLYFFVWLFQRFPLVVDLDHDNLVVSLMAGIIGGLGGGLVFRNGGTIGGADIIAKLLEDKLGLQLNQALLGID LFVMIVSLTYISLPQMMYALIASFMYGQIVRLVQQGGYSARGIFIVSEQAEKIARFIMDELGRGVTYLTGEGAYSGRRKK VIYVALGRRDIRELKAFLTQVDPNAFITYFDVNEVNSPEFLTIKSKYHKKRK
Sequences:
>Translated_292_residues MSIDQRLQLKKFCFIILGAAIYAFAFVYFYMANRIAANGLAGLTLVGKALFEIDPSLIGYLINLPLVLLGARCFGKRAMV YTVTGILSLYFFVWLFQRFPLVVDLDHDNLVVSLMAGIIGGLGGGLVFRNGGTIGGADIIAKLLEDKLGLQLNQALLGID LFVMIVSLTYISLPQMMYALIASFMYGQIVRLVQQGGYSARGIFIVSEQAEKIARFIMDELGRGVTYLTGEGAYSGRRKK VIYVALGRRDIRELKAFLTQVDPNAFITYFDVNEVNSPEFLTIKSKYHKKRK >Mature_291_residues SIDQRLQLKKFCFIILGAAIYAFAFVYFYMANRIAANGLAGLTLVGKALFEIDPSLIGYLINLPLVLLGARCFGKRAMVY TVTGILSLYFFVWLFQRFPLVVDLDHDNLVVSLMAGIIGGLGGGLVFRNGGTIGGADIIAKLLEDKLGLQLNQALLGIDL FVMIVSLTYISLPQMMYALIASFMYGQIVRLVQQGGYSARGIFIVSEQAEKIARFIMDELGRGVTYLTGEGAYSGRRKKV IYVALGRRDIRELKAFLTQVDPNAFITYFDVNEVNSPEFLTIKSKYHKKRK
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0750 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 - InterPro: IPR019264 [H]
Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]
EC number: NA
Molecular weight: Translated: 32477; Mature: 32346
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDQRLQLKKFCFIILGAAIYAFAFVYFYMANRIAANGLAGLTLVGKALFEIDPSLIGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH LINLPLVLLGARCFGKRAMVYTVTGILSLYFFVWLFQRFPLVVDLDHDNLVVSLMAGIIG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH GLGGGLVFRNGGTIGGADIIAKLLEDKLGLQLNQALLGIDLFVMIVSLTYISLPQMMYAL CCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IASFMYGQIVRLVQQGGYSARGIFIVSEQAEKIARFIMDELGRGVTYLTGEGAYSGRRKK HHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCE VIYVALGRRDIRELKAFLTQVDPNAFITYFDVNEVNSPEFLTIKSKYHKKRK EEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEHHHHCCCC >Mature Secondary Structure SIDQRLQLKKFCFIILGAAIYAFAFVYFYMANRIAANGLAGLTLVGKALFEIDPSLIGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH LINLPLVLLGARCFGKRAMVYTVTGILSLYFFVWLFQRFPLVVDLDHDNLVVSLMAGIIG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH GLGGGLVFRNGGTIGGADIIAKLLEDKLGLQLNQALLGIDLFVMIVSLTYISLPQMMYAL CCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IASFMYGQIVRLVQQGGYSARGIFIVSEQAEKIARFIMDELGRGVTYLTGEGAYSGRRKK HHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCE VIYVALGRRDIRELKAFLTQVDPNAFITYFDVNEVNSPEFLTIKSKYHKKRK EEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]