Click here to switch to the map view.

The map label for this gene is pepDB [H]

Identifier: 15675831

GI number: 15675831

Start: 1719939

End: 1721435

Strand: Direct

Name: pepDB [H]

Synonym: SPy_2066

Alternate gene names: 15675831

Gene position: 1719939-1721435 (Clockwise)

Preceding gene: 15675829

Following gene: 15675837

Centisome position: 92.85

GC content: 39.48

Gene sequence:

>1497_bases
ATGATAAACAAAAAAATATCACTTGGAGTTTTAAGTATTCTGACAGCCTTTTCGCTTCAAAGTGTTAGTTATGCTTGTAC
TGGTTTTATTATTGGCAAAGATTTAACCAAAGACGGTTCTCTTCTTTATGGTCGAACAGAAGATCTTGAGCCACACCATA
ATAAAAATTTCATTGTACGTCTAGCAAAGGACAATCCTGCTGGCGAAAAATGGAAAGACCTCTCTAATGGTTTTGAGTAC
CCCTTGCCTGAGCATTCTTATCGCTATAGTGCGATTCCTGATGTAACACCTAACAAAGGCGTTTATGACGAAGCTGGTTT
TAATGAGTTTGGCGTCTCTATGTCTGCAACAGTATCAGCTTCAGCTAATGATGCCATCCAAAAAATTGATCCTTACGTCA
AAAATGGCTTAGCGGAATCATCTATGACCAGTGTCATTTTACCAAGTGTCAAAACAGCCCGTGAAGGTGTCGCATTGATC
GCTAAAATAGTCACTGAAAAAGGAGCTGCTGAAGGAAATATTGTTACCTTGGCTGACAAAGACGGCATCTGGTACATGGA
AATTCTCTCTGGTCACCAATACGTTGCCATCAAATTCCCAGATGATAAATACGCTGTTTTTCCAAATACCTTCTATCTCG
GACATGTCGATTTCAATGATAAGGAAAATACGATTGCCTCAGAAGATGTGGAAAAAGTCGCTAAAAAAGCCAAATCTTAT
ACCGAAGTTGATGGTAAATTTCATATTGCCAAATCTTACAATCCACCACTAAACGATGCCAACCGCTCTCGCTCTTTCTC
AGGGATTAAATCACTTGACCCTGATTCAAAAGTAACTTATAAAGACAGCAATTATGAGTTGCTCCAAAGCACTGATAAGA
CCTTCAGTCTAGAAGATGCGATGAAACTGCAACGTAATCGTTTTGAGGGGCTGGATCTTAAACCACTTGATCAGATGGCA
TTAGACGGTAAGGGTAAACCAAAATCCAAAAAAGCTGTTAAAGGTTATGCTTATCCCATATCAAATCCTAATGTCATGGA
AGCTCATATTTTCCAACTGAAAAAAGACATCCCTGCTGAATTGGGTGGTGTCATGTGGCTATCTATTGGCAGTCCTCGTA
ATGCCCCTTACTTGCCATACCTTGGCAATATCAGTAGAACCTATGAAGCCTATCAAGAAAAAAGCACCCAATATAACGAT
AAGTCATGGTATTGGACGGTGTCACACATTAATGATCTCGTGGCTGCTCATCCAAAACCATTTGGAACTAAAGTGATTGA
TGAGATGAAAGGCTTGGAAAAAACCTGGATAGCCGAACAAGACAAAAGCACCAAAGAAATCAGTGACTTAGTCGTCAGTG
ACCCCAAAGCTGCTCAAGAAAAAGCTGATAAGATTTCACTAGATCGCGCTGAAAAAACCTTCAAACGCTTAAAAGCTATT
GAAGCCAAGTTGGTTAAAGAAAAACCCAAAAACAAGAAAGGCTTGAATAGATCATAA

Upstream 100 bases:

>100_bases
ATAGCTAACAATTTCAAAACACTTCATAAAAGACTTGAATTTTTAAAAAGAGCATTTTATAATGTCTGTGAAAGCGTTAT
CGTTTACTAGGAGGATTCGC

Downstream 100 bases:

>100_bases
TACCATAACCCAAAAAAGCTTGTATCAACAAGTTTCTCCATAACTAGAGCTGAAGTCAAAAAATAAGGTCTCACACTTTG
TGAAACCTTATCGGTATAGG

Product: putative dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MINKKISLGVLSILTAFSLQSVSYACTGFIIGKDLTKDGSLLYGRTEDLEPHHNKNFIVRLAKDNPAGEKWKDLSNGFEY
PLPEHSYRYSAIPDVTPNKGVYDEAGFNEFGVSMSATVSASANDAIQKIDPYVKNGLAESSMTSVILPSVKTAREGVALI
AKIVTEKGAAEGNIVTLADKDGIWYMEILSGHQYVAIKFPDDKYAVFPNTFYLGHVDFNDKENTIASEDVEKVAKKAKSY
TEVDGKFHIAKSYNPPLNDANRSRSFSGIKSLDPDSKVTYKDSNYELLQSTDKTFSLEDAMKLQRNRFEGLDLKPLDQMA
LDGKGKPKSKKAVKGYAYPISNPNVMEAHIFQLKKDIPAELGGVMWLSIGSPRNAPYLPYLGNISRTYEAYQEKSTQYND
KSWYWTVSHINDLVAAHPKPFGTKVIDEMKGLEKTWIAEQDKSTKEISDLVVSDPKAAQEKADKISLDRAEKTFKRLKAI
EAKLVKEKPKNKKGLNRS

Sequences:

>Translated_498_residues
MINKKISLGVLSILTAFSLQSVSYACTGFIIGKDLTKDGSLLYGRTEDLEPHHNKNFIVRLAKDNPAGEKWKDLSNGFEY
PLPEHSYRYSAIPDVTPNKGVYDEAGFNEFGVSMSATVSASANDAIQKIDPYVKNGLAESSMTSVILPSVKTAREGVALI
AKIVTEKGAAEGNIVTLADKDGIWYMEILSGHQYVAIKFPDDKYAVFPNTFYLGHVDFNDKENTIASEDVEKVAKKAKSY
TEVDGKFHIAKSYNPPLNDANRSRSFSGIKSLDPDSKVTYKDSNYELLQSTDKTFSLEDAMKLQRNRFEGLDLKPLDQMA
LDGKGKPKSKKAVKGYAYPISNPNVMEAHIFQLKKDIPAELGGVMWLSIGSPRNAPYLPYLGNISRTYEAYQEKSTQYND
KSWYWTVSHINDLVAAHPKPFGTKVIDEMKGLEKTWIAEQDKSTKEISDLVVSDPKAAQEKADKISLDRAEKTFKRLKAI
EAKLVKEKPKNKKGLNRS
>Mature_498_residues
MINKKISLGVLSILTAFSLQSVSYACTGFIIGKDLTKDGSLLYGRTEDLEPHHNKNFIVRLAKDNPAGEKWKDLSNGFEY
PLPEHSYRYSAIPDVTPNKGVYDEAGFNEFGVSMSATVSASANDAIQKIDPYVKNGLAESSMTSVILPSVKTAREGVALI
AKIVTEKGAAEGNIVTLADKDGIWYMEILSGHQYVAIKFPDDKYAVFPNTFYLGHVDFNDKENTIASEDVEKVAKKAKSY
TEVDGKFHIAKSYNPPLNDANRSRSFSGIKSLDPDSKVTYKDSNYELLQSTDKTFSLEDAMKLQRNRFEGLDLKPLDQMA
LDGKGKPKSKKAVKGYAYPISNPNVMEAHIFQLKKDIPAELGGVMWLSIGSPRNAPYLPYLGNISRTYEAYQEKSTQYND
KSWYWTVSHINDLVAAHPKPFGTKVIDEMKGLEKTWIAEQDKSTKEISDLVVSDPKAAQEKADKISLDRAEKTFKRLKAI
EAKLVKEKPKNKKGLNRS

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 55499; Mature: 55499

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKKISLGVLSILTAFSLQSVSYACTGFIIGKDLTKDGSLLYGRTEDLEPHHNKNFIVR
CCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEE
LAKDNPAGEKWKDLSNGFEYPLPEHSYRYSAIPDVTPNKGVYDEAGFNEFGVSMSATVSA
EECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEC
SANDAIQKIDPYVKNGLAESSMTSVILPSVKTAREGVALIAKIVTEKGAAEGNIVTLADK
CCHHHHHHHCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
DGIWYMEILSGHQYVAIKFPDDKYAVFPNTFYLGHVDFNDKENTIASEDVEKVAKKAKSY
CCEEEEEEECCCEEEEEEECCCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
TEVDGKFHIAKSYNPPLNDANRSRSFSGIKSLDPDSKVTYKDSNYELLQSTDKTFSLEDA
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCHHHH
MKLQRNRFEGLDLKPLDQMALDGKGKPKSKKAVKGYAYPISNPNVMEAHIFQLKKDIPAE
HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHH
LGGVMWLSIGSPRNAPYLPYLGNISRTYEAYQEKSTQYNDKSWYWTVSHINDLVAAHPKP
HCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCC
FGTKVIDEMKGLEKTWIAEQDKSTKEISDLVVSDPKAAQEKADKISLDRAEKTFKRLKAI
CCHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAKLVKEKPKNKKGLNRS
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MINKKISLGVLSILTAFSLQSVSYACTGFIIGKDLTKDGSLLYGRTEDLEPHHNKNFIVR
CCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEE
LAKDNPAGEKWKDLSNGFEYPLPEHSYRYSAIPDVTPNKGVYDEAGFNEFGVSMSATVSA
EECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEC
SANDAIQKIDPYVKNGLAESSMTSVILPSVKTAREGVALIAKIVTEKGAAEGNIVTLADK
CCHHHHHHHCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
DGIWYMEILSGHQYVAIKFPDDKYAVFPNTFYLGHVDFNDKENTIASEDVEKVAKKAKSY
CCEEEEEEECCCEEEEEEECCCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
TEVDGKFHIAKSYNPPLNDANRSRSFSGIKSLDPDSKVTYKDSNYELLQSTDKTFSLEDA
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCHHHH
MKLQRNRFEGLDLKPLDQMALDGKGKPKSKKAVKGYAYPISNPNVMEAHIFQLKKDIPAE
HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHH
LGGVMWLSIGSPRNAPYLPYLGNISRTYEAYQEKSTQYNDKSWYWTVSHINDLVAAHPKP
HCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCC
FGTKVIDEMKGLEKTWIAEQDKSTKEISDLVVSDPKAAQEKADKISLDRAEKTFKRLKAI
CCHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAKLVKEKPKNKKGLNRS
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]