Click here to switch to the map view.

The map label for this gene is lrp [H]

Identifier: 15675769

GI number: 15675769

Start: 1646033

End: 1646881

Strand: Reverse

Name: lrp [H]

Synonym: SPy_1978

Alternate gene names: 15675769

Gene position: 1646881-1646033 (Counterclockwise)

Preceding gene: 15675771

Following gene: 15675768

Centisome position: 88.9

GC content: 44.41

Gene sequence:

>849_bases
ATGGAGCTAAAAGACTATTTTCCAGAGATGCAAGTAGGCCCTCATCCGTTAGGAGATAAAGATTGGATGAGTATCAAAGA
AGGGGACCAATATGTGCATTTTCCCAAATCATGTTTATCCGAAAAAGAGCGCTTATTACTTGAGGTGGGGCTGGGTCAGT
GTGAGGTCTTGCAGCCGCTAGGGTCACCTTGGCAGCGGTATTTGCTTGATCATCAGGGCAATCCCCCTCAGCTGTATGAG
ACTTCTCAGTTCATTTACCTTAATCATCAGCAGGCTTTACCAGATGACTTAGTTGAGTTGCTCCAACAAATGATTGCAGG
GCTTGAAGTCATTTTGCCTATCAGTGCAACCCAAACGGCATTTTTATGCCGACAAGCAATCTCAATAAAGGTCTTGCGCT
GGCTTGAAGATCTCCTGCCAACGCTAGAAAGTGATTTTGGTTTGGCCTTAACCATGTTTGTTGGAAATGCCTGGTATCAG
GTAGCTGCGGGTACATTGAGAGAGTGTTTTGAGGAGGAATGTCAGCTGTTAACGGCCTATTTAAGGCAACAATCAGGCAG
AAAATTATTAACATTTTCAGGACTGATGCTGTGGTCTTTGCTGTCGCACCACACTTTTTTGGCATTGACGCGTCAGTTTC
ACCAATTCCTAAGTCCTCAAAGTGATATGGCCGATGTGGTTCACGCGCTATGGTCAGAACACGGCAATCTGGTGCAGACA
GCGCAGCGCTTGTATATTCACCGTAACTCCTTGCAATACAAACTTGATAAATTTGCTCAGCAATCAGGACTCCACTTGAA
GCAATTGGATGATTTAGCCTTTGCTCATCTCTTTTTGTTGAAATATTAG

Upstream 100 bases:

>100_bases
AAAAGGCAGAAAATACAAAATCGTGCTGACAACAAACCGAACTGTGTGATAAAGAGTCATGTGTTATAATGGTTTAAAGA
CCGTCATGAAAGGAATGGCT

Downstream 100 bases:

>100_bases
GAAAGGCACAGGGCTTTCTTTTTTGCTGCCTGGACTGTAGCTGATAGGGAGAATGATAGATCGTTCAGCTTGTTTTGGCT
CCTGTGACCGGCCTGTGTTT

Product: leucine-rich protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MELKDYFPEMQVGPHPLGDKDWMSIKEGDQYVHFPKSCLSEKERLLLEVGLGQCEVLQPLGSPWQRYLLDHQGNPPQLYE
TSQFIYLNHQQALPDDLVELLQQMIAGLEVILPISATQTAFLCRQAISIKVLRWLEDLLPTLESDFGLALTMFVGNAWYQ
VAAGTLRECFEEECQLLTAYLRQQSGRKLLTFSGLMLWSLLSHHTFLALTRQFHQFLSPQSDMADVVHALWSEHGNLVQT
AQRLYIHRNSLQYKLDKFAQQSGLHLKQLDDLAFAHLFLLKY

Sequences:

>Translated_282_residues
MELKDYFPEMQVGPHPLGDKDWMSIKEGDQYVHFPKSCLSEKERLLLEVGLGQCEVLQPLGSPWQRYLLDHQGNPPQLYE
TSQFIYLNHQQALPDDLVELLQQMIAGLEVILPISATQTAFLCRQAISIKVLRWLEDLLPTLESDFGLALTMFVGNAWYQ
VAAGTLRECFEEECQLLTAYLRQQSGRKLLTFSGLMLWSLLSHHTFLALTRQFHQFLSPQSDMADVVHALWSEHGNLVQT
AQRLYIHRNSLQYKLDKFAQQSGLHLKQLDDLAFAHLFLLKY
>Mature_282_residues
MELKDYFPEMQVGPHPLGDKDWMSIKEGDQYVHFPKSCLSEKERLLLEVGLGQCEVLQPLGSPWQRYLLDHQGNPPQLYE
TSQFIYLNHQQALPDDLVELLQQMIAGLEVILPISATQTAFLCRQAISIKVLRWLEDLLPTLESDFGLALTMFVGNAWYQ
VAAGTLRECFEEECQLLTAYLRQQSGRKLLTFSGLMLWSLLSHHTFLALTRQFHQFLSPQSDMADVVHALWSEHGNLVQT
AQRLYIHRNSLQYKLDKFAQQSGLHLKQLDDLAFAHLFLLKY

Specific function: Not essential for viability or growth. Nevertheless, uncontrolled production in E.coli is detrimental to the normal physiology of the bacteria [H]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32517; Mature: 32517

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKDYFPEMQVGPHPLGDKDWMSIKEGDQYVHFPKSCLSEKERLLLEVGLGQCEVLQPL
CCCHHHCCCCCCCCCCCCCCCCCCHHCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHC
GSPWQRYLLDHQGNPPQLYETSQFIYLNHQQALPDDLVELLQQMIAGLEVILPISATQTA
CCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHEEECCCCHHHH
FLCRQAISIKVLRWLEDLLPTLESDFGLALTMFVGNAWYQVAAGTLRECFEEECQLLTAY
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQQSGRKLLTFSGLMLWSLLSHHTFLALTRQFHQFLSPQSDMADVVHALWSEHGNLVQT
HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH
AQRLYIHRNSLQYKLDKFAQQSGLHLKQLDDLAFAHLFLLKY
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELKDYFPEMQVGPHPLGDKDWMSIKEGDQYVHFPKSCLSEKERLLLEVGLGQCEVLQPL
CCCHHHCCCCCCCCCCCCCCCCCCHHCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHC
GSPWQRYLLDHQGNPPQLYETSQFIYLNHQQALPDDLVELLQQMIAGLEVILPISATQTA
CCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHEEECCCCHHHH
FLCRQAISIKVLRWLEDLLPTLESDFGLALTMFVGNAWYQVAAGTLRECFEEECQLLTAY
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQQSGRKLLTFSGLMLWSLLSHHTFLALTRQFHQFLSPQSDMADVVHALWSEHGNLVQT
HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH
AQRLYIHRNSLQYKLDKFAQQSGLHLKQLDDLAFAHLFLLKY
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8232196; 2989113 [H]