Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
---|---|
Accession | NC_002737 |
Length | 1,852,441 |
Click here to switch to the map view.
The map label for this gene is isp2 [H]
Identifier: 15675636
GI number: 15675636
Start: 1493345
End: 1494856
Strand: Reverse
Name: isp2 [H]
Synonym: SPy_1801
Alternate gene names: 15675636
Gene position: 1494856-1493345 (Counterclockwise)
Preceding gene: 15675637
Following gene: 15675635
Centisome position: 80.7
GC content: 40.54
Gene sequence:
>1512_bases ATGAATAAAAACAAACTATTAAGAGTTGCCATGCTACTAAGTCTCTTAGCCCCGACAGCAGAAAGCATGACAGTGCTGGC TCAAGATGTAATGCTTGAGACGCATAAAGCAACTACAAATGAAACCAGTGATTCTTCTTCAAAAGAGGAAAATAATAAAA ATGCAGCACCTACAACATCAGATAAAACTGACCAAGGTCCCCTTGATGCTTCTGCAGAAACAAACTCTAATAGTCTTGTT AACGCGGATGATAAAAAAAGAAGCGATTCTAGTCAGTCTGCTATAGGCTCTTCGGACAACAAGGCAGAAGCAGAAAACCA GGTAGATGATAAATCAACTGATCATTCGAAATCAACTGATCATTCGAAACCAACTGACCAGCCCAAACCATCACCATCTA AAGTTGATACGGCACCTGCTTCTTCATTGTCGAAACAACTGCCAGAGGCAAGAACTCCTATTCAGTCGTTGTCCCCTTAC GTATCAGATTTAGATTTGAGTGAGATAGATATCCCTTCTGTCAACACATACGCGGCATATGTAGAGCATTGGAGTGGTAA AAATGCCTATACCCACCATCTTTTATCTCGCCGTTATGGTATTAAAGCTGACCAGATTGATAGTTACTTAAAATCAACAG GCATTGCCTATGACAGCACACGTATTAATGGTGAGAAGCTATTGCAATGGGAAAAGAAAAGTGGGCTGGATGTTCGAGCT ATCGTAGCTATTGCGATGTCTGAGAGTTCTTTAGGAACTCAAGGGATTGCAACTTTGCTTGGAGCTAATATGTTTGGCTA TGCAGCTTTTGATCTAGATCCGACTCAAGCAAGTAAGTTTAATGATGATAGTGCTATTGTCAAAATGACACAAGACACCA TTATTAAAAACAAAAATAGCAATTTTGCACTTCAAGATTTAAAAGCGGCTAAGTTTTCACGAGGTCAATTAAACTTTGCA AGTGACGGGGGTGTTTATTTTACTGATACTACTGGTAGTGGTAAACGTCGCGCACAAATTATGGAAGACCTGGATAAGTG GATTGATGACCATGGTGGCACACCAGCCATTCCAGCCGAATTGAAAGTGCAGTCATCAGCTAGTTTTGCATCTGTGCCAG CAGGTTATAAGCTCTCTAAGAGTTATGATGTCTTGGGTTATCAAGCTTCGAGTTATGCTTGGGGACAATGCACTTGGTAT GTGTATAATCGCGCCAAAGAATTGGGTTACCAATTTGATCCTTTTATGGGAAATGGTGGAGATTGGAAGTATAAAGTAGG GTATGCCCTTTCAAAGACTCCAAAAGTAGGTTATGCTATTTCATTTGCACCAGGGCAAGCGGGCGCTGATGGCACTTATG GCCACGTATCAATTGTAGAAGATGTTAGAAAAGATGGGTCTATTCTTATTTCAGAGTCTAACTGTATCGGCTTAGGTAAG ATTTCTTATCGTACCTTTACAGCTCAGCAGGCTGAACAGCTAACATATGTTATTGGCAAGAGTAAAAACTAA
Upstream 100 bases:
>100_bases CTCGGATATATTAAGAAAATCATGTAAAAATAATTGCATTGTGCTTATCTTAAATGTTATAATAAAGTGAGGACATTAGA AAGAAGTGACTAATTAATAT
Downstream 100 bases:
>100_bases TAACTAATGACTTTTCTTAAGGCTTAATTTTCTTAGCGGGAGTTAGGCCTTTTAAACTGTTGGTGTAACACGATAAAGTT TCAAGTCAATAAATGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MNKNKLLRVAMLLSLLAPTAESMTVLAQDVMLETHKATTNETSDSSSKEENNKNAAPTTSDKTDQGPLDASAETNSNSLV NADDKKRSDSSQSAIGSSDNKAEAENQVDDKSTDHSKSTDHSKPTDQPKPSPSKVDTAPASSLSKQLPEARTPIQSLSPY VSDLDLSEIDIPSVNTYAAYVEHWSGKNAYTHHLLSRRYGIKADQIDSYLKSTGIAYDSTRINGEKLLQWEKKSGLDVRA IVAIAMSESSLGTQGIATLLGANMFGYAAFDLDPTQASKFNDDSAIVKMTQDTIIKNKNSNFALQDLKAAKFSRGQLNFA SDGGVYFTDTTGSGKRRAQIMEDLDKWIDDHGGTPAIPAELKVQSSASFASVPAGYKLSKSYDVLGYQASSYAWGQCTWY VYNRAKELGYQFDPFMGNGGDWKYKVGYALSKTPKVGYAISFAPGQAGADGTYGHVSIVEDVRKDGSILISESNCIGLGK ISYRTFTAQQAEQLTYVIGKSKN
Sequences:
>Translated_503_residues MNKNKLLRVAMLLSLLAPTAESMTVLAQDVMLETHKATTNETSDSSSKEENNKNAAPTTSDKTDQGPLDASAETNSNSLV NADDKKRSDSSQSAIGSSDNKAEAENQVDDKSTDHSKSTDHSKPTDQPKPSPSKVDTAPASSLSKQLPEARTPIQSLSPY VSDLDLSEIDIPSVNTYAAYVEHWSGKNAYTHHLLSRRYGIKADQIDSYLKSTGIAYDSTRINGEKLLQWEKKSGLDVRA IVAIAMSESSLGTQGIATLLGANMFGYAAFDLDPTQASKFNDDSAIVKMTQDTIIKNKNSNFALQDLKAAKFSRGQLNFA SDGGVYFTDTTGSGKRRAQIMEDLDKWIDDHGGTPAIPAELKVQSSASFASVPAGYKLSKSYDVLGYQASSYAWGQCTWY VYNRAKELGYQFDPFMGNGGDWKYKVGYALSKTPKVGYAISFAPGQAGADGTYGHVSIVEDVRKDGSILISESNCIGLGK ISYRTFTAQQAEQLTYVIGKSKN >Mature_503_residues MNKNKLLRVAMLLSLLAPTAESMTVLAQDVMLETHKATTNETSDSSSKEENNKNAAPTTSDKTDQGPLDASAETNSNSLV NADDKKRSDSSQSAIGSSDNKAEAENQVDDKSTDHSKSTDHSKPTDQPKPSPSKVDTAPASSLSKQLPEARTPIQSLSPY VSDLDLSEIDIPSVNTYAAYVEHWSGKNAYTHHLLSRRYGIKADQIDSYLKSTGIAYDSTRINGEKLLQWEKKSGLDVRA IVAIAMSESSLGTQGIATLLGANMFGYAAFDLDPTQASKFNDDSAIVKMTQDTIIKNKNSNFALQDLKAAKFSRGQLNFA SDGGVYFTDTTGSGKRRAQIMEDLDKWIDDHGGTPAIPAELKVQSSASFASVPAGYKLSKSYDVLGYQASSYAWGQCTWY VYNRAKELGYQFDPFMGNGGDWKYKVGYALSKTPKVGYAISFAPGQAGADGTYGHVSIVEDVRKDGSILISESNCIGLGK ISYRTFTAQQAEQLTYVIGKSKN
Specific function: Peptidoglycan hydrolase involved in the splitting of the septum during cell division [H]
COG id: COG3942
COG function: function code R; Surface antigen
Gene ontology:
Cell location: Secreted. Cell surface (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase C51 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007921 - InterPro: IPR018392 - InterPro: IPR002482 [H]
Pfam domain/function: PF05257 CHAP; PF01476 LysM [H]
EC number: =3.5.1.28 [H]
Molecular weight: Translated: 54461; Mature: 54461
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50911 CHAP ; PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNKLLRVAMLLSLLAPTAESMTVLAQDVMLETHKATTNETSDSSSKEENNKNAAPTTS CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DKTDQGPLDASAETNSNSLVNADDKKRSDSSQSAIGSSDNKAEAENQVDDKSTDHSKSTD CCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCCC HSKPTDQPKPSPSKVDTAPASSLSKQLPEARTPIQSLSPYVSDLDLSEIDIPSVNTYAAY CCCCCCCCCCCCCCCCCCCHHHHHHHCCHHCCCHHHHCHHHHCCCCCCCCCCCCCHHHHH VEHWSGKNAYTHHLLSRRYGIKADQIDSYLKSTGIAYDSTRINGEKLLQWEKKSGLDVRA HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCHHHHHEEHHHCCCCEEE IVAIAMSESSLGTQGIATLLGANMFGYAAFDLDPTQASKFNDDSAIVKMTQDTIIKNKNS EEEEEECCCCCCHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCEEEEEHHHHEECCCC NFALQDLKAAKFSRGQLNFASDGGVYFTDTTGSGKRRAQIMEDLDKWIDDHGGTPAIPAE CCCHHHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE LKVQSSASFASVPAGYKLSKSYDVLGYQASSYAWGQCTWYVYNRAKELGYQFDPFMGNGG EEEECCCCHHCCCCCCEECCCCEEEEEECCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCC DWKYKVGYALSKTPKVGYAISFAPGQAGADGTYGHVSIVEDVRKDGSILISESNCIGLGK CEEEEECEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCEEEECC ISYRTFTAQQAEQLTYVIGKSKN CEEEEECHHHHHHEEEEECCCCC >Mature Secondary Structure MNKNKLLRVAMLLSLLAPTAESMTVLAQDVMLETHKATTNETSDSSSKEENNKNAAPTTS CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DKTDQGPLDASAETNSNSLVNADDKKRSDSSQSAIGSSDNKAEAENQVDDKSTDHSKSTD CCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCCC HSKPTDQPKPSPSKVDTAPASSLSKQLPEARTPIQSLSPYVSDLDLSEIDIPSVNTYAAY CCCCCCCCCCCCCCCCCCCHHHHHHHCCHHCCCHHHHCHHHHCCCCCCCCCCCCCHHHHH VEHWSGKNAYTHHLLSRRYGIKADQIDSYLKSTGIAYDSTRINGEKLLQWEKKSGLDVRA HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCHHHHHEEHHHCCCCEEE IVAIAMSESSLGTQGIATLLGANMFGYAAFDLDPTQASKFNDDSAIVKMTQDTIIKNKNS EEEEEECCCCCCHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCEEEEEHHHHEECCCC NFALQDLKAAKFSRGQLNFASDGGVYFTDTTGSGKRRAQIMEDLDKWIDDHGGTPAIPAE CCCHHHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE LKVQSSASFASVPAGYKLSKSYDVLGYQASSYAWGQCTWYVYNRAKELGYQFDPFMGNGG EEEECCCCHHCCCCCCEECCCCEEEEEECCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCC DWKYKVGYALSKTPKVGYAISFAPGQAGADGTYGHVSIVEDVRKDGSILISESNCIGLGK CEEEEECEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCEEEECC ISYRTFTAQQAEQLTYVIGKSKN CEEEEECHHHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA