Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ykrA [H]
Identifier: 15675621
GI number: 15675621
Start: 1472075
End: 1473463
Strand: Reverse
Name: ykrA [H]
Synonym: SPy_1781
Alternate gene names: 15675621
Gene position: 1473463-1472075 (Counterclockwise)
Preceding gene: 15675623
Following gene: 15675619
Centisome position: 79.54
GC content: 37.72
Gene sequence:
>1389_bases TTGACAGTAAAAGCAGTCTTTTTTGATATTGATGGGACCCTTCTCAATGATCGTAAAAATATCCAAAAAACAACGCAAAA AGCCATCCAACAACTCAAAAAACAAGGCATTATGGTCGGTTTAGCAACTGGTCGTGGACCGGGATTTGTACAACCTTTTC TAGAAAATTTTGGATTAGATTTTGCCGTTACTTACAATGGGCAATATATCTTAACAAGAGATAAGGTCTTATATCAGAAT CAATTGCCAAAGTCGATGATTTACAAAGTGATTCGCTATGCCAACGAAAAAAAGCGAGAAATTTCTCTTGGAACAGCTTC TGGATTAGCAGGATCGCGTATTATTGATATGGGGACTAGCCCATTTGGACAAGTCATTAGTAGTTTTGTGCCCAAAAGTT GGGCAAGAACAGTTGAGGGTAGTTTTAAGCATTTGATTCGCCGAATCAAGCCTCAGAGTTTTAGAAATTTAGTAACTATT ATGCGGGAGCCTATTTATCAGGTTGTTCTGGTAGCGTCACAAGCTGAAACTAAGAAAATACAAGAGAAGTTCCCTCATAT AAAAATTACAAGAAGTAGTCCTTATTCCTTGGATCTGATCTCTGTTGATCAATCAAAAATAAAAGGAATTGAACGTTTGG GAGAGATGTTTGGATTTGACTTGTCTGAAGTGATGGCTTTTGGAGATTCAGATAATGACCTTGAAATGTTATCAGGAGTT GGTATCGGTATTGCTATGGGAAATGCTGAAACTGTGGTAAAAGATGGAGCCCATTTCACTACCGACTCTAATAATAATGA TGGGATTTCCAAAGCCTTAGCTCACTACGGTCTCATCCATTTTGATATAGAGAAGAGCTTTAAAAGCCGTGATGAAAATT TTAATAAAGTCAAAGATTTTCATCGTCTGATGGACTCAGATACTATTGAAACACCGCGTAGTTATACCATTTCAGAAGCT GGTTATAGGTCAGGCTTTAAAGTAGAAGAAATTGTTGAGTTTCTTTACGCAGCAAGCAAGGGAGACCAACAACAATTTAC ACAGGCTATTTTCGATTTGCATGGTGCTGTTGACCAAGCAGCTAATAAGGTACAAGCTAAAAAACATGTTGAAACGCCCC TGATTGGGCAAGTTGATGCCTTAGCGGATTTGCTTTATTTTACTTATGGTTCTTTTGTACTGATGGGAGTAGATCCACAA CCTATATTTGAAGCAGTACATGAAGCAAATATGGCTAAAATTTTTCCAGATGGCAAGGCACACTTTGACCCCGTTACCCA TAAAATTCAAAAACCTGACTATTGGCAAGAGCGTCACGCACCTGAAGTAGCCATAAAAAAAGAGTTAGACAAACAATTAC AAAAATCACTACAACGATTCGATAAATAG
Upstream 100 bases:
>100_bases CCAGTGTGTAAGACTAGGATTTTTTTCATTTGATTGTCAAACTTCCTTTTATTTATGATATAATCTATTCTATCATAAAC ACAGGAGGCAAAAGAAGGTT
Downstream 100 bases:
>100_bases AGGTTTACTCTTTTAAATATCAAGAAATAAAAAGATATTGACTAGACTTAGCTCAGCACAAAAAAACAAGCAATTTCGTT GTAGATGCTGCTTGTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MTVKAVFFDIDGTLLNDRKNIQKTTQKAIQQLKKQGIMVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQN QLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDMGTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTI MREPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGV GIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYGLIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEA GYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAVDQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQ PIFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSLQRFDK
Sequences:
>Translated_462_residues MTVKAVFFDIDGTLLNDRKNIQKTTQKAIQQLKKQGIMVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQN QLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDMGTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTI MREPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGV GIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYGLIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEA GYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAVDQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQ PIFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSLQRFDK >Mature_461_residues TVKAVFFDIDGTLLNDRKNIQKTTQKAIQQLKKQGIMVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQNQ LPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDMGTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTIM REPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGVG IGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYGLIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEAG YRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAVDQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQP IFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSLQRFDK
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI2367265, Length=287, Percent_Identity=27.5261324041812, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI87081790, Length=293, Percent_Identity=27.3037542662116, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 51981; Mature: 51850
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS01228 COF_1 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKAVFFDIDGTLLNDRKNIQKTTQKAIQQLKKQGIMVGLATGRGPGFVQPFLENFGLD CCEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCC FAVTYNGQYILTRDKVLYQNQLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDMGTS EEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCHHHEEECCCCCCCCCCEEEECCCC PFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTIMREPIYQVVLVASQAETKKI CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGV HHHCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCC GIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYGLIHFDIEKSFKSRDENFNKVKDF CEEEEECCCHHHHCCCCEEECCCCCCCHHHHHHHHHCEEEEEHHHHHHHCCCCHHHHHHH HRLMDSDTIETPRSYTISEAGYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAVDQA HHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQPIFEAVHEANMAKIFPDGKA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCEECCCCCC HFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSLQRFDK CCCHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVKAVFFDIDGTLLNDRKNIQKTTQKAIQQLKKQGIMVGLATGRGPGFVQPFLENFGLD CEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCC FAVTYNGQYILTRDKVLYQNQLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDMGTS EEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCHHHEEECCCCCCCCCCEEEECCCC PFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTIMREPIYQVVLVASQAETKKI CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGV HHHCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCC GIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYGLIHFDIEKSFKSRDENFNKVKDF CEEEEECCCHHHHCCCCEEECCCCCCCHHHHHHHHHCEEEEEHHHHHHHCCCCHHHHHHH HRLMDSDTIETPRSYTISEAGYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAVDQA HHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQPIFEAVHEANMAKIFPDGKA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCEECCCCCC HFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSLQRFDK CCCHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]