Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
---|---|
Accession | NC_002737 |
Length | 1,852,441 |
Click here to switch to the map view.
The map label for this gene is fabF [H]
Identifier: 15675597
GI number: 15675597
Start: 1449028
End: 1450260
Strand: Reverse
Name: fabF [H]
Synonym: SPy_1748
Alternate gene names: 15675597
Gene position: 1450260-1449028 (Counterclockwise)
Preceding gene: 15675598
Following gene: 15675596
Centisome position: 78.29
GC content: 41.93
Gene sequence:
>1233_bases ATGACATTTAAAAGAGTAGTGGTAACAGGTTATGGTCTAACATCTCCAATCGGGCATGATCCTGAAACGTTTTGGAACAA TCTGAAAGCTGGCCAAATTGGTATTGGTCCTATTACTAAATTTGACACGACTGATTATGCAGTCAAGAATGCTGCTGAAA TTCAGGATTTTCCATTTGACAAATACTTTGTGAAAAAAGATTTGAACCGTTTCGATAGATATTCTCTTTATGCTCTTTAC GCAGCGAAAGAGGCTATTAATCATGCTGATTTAAATATTGAGATGGTTGATTCCGATCGATTTGGCGTTATTGTTGCTTC AGGTATTGGTGGAATTGCGGAGATTGAAGAGCAAGTGATTCGCTTACATGAAAAAGGGCCAAAACGTGTGAAGCCAATGA CGTTGCCAAAAGCGCTACCAAATATGGCTGCAGGAAATGTCGCCATGTCTTTAAAAGCTCAAGGAGTATGTAAATCAATT AATACTGCCTGCGCTTCTTCAAATGATGCGATTGGGGATGCCTTTCGTGCCATTAAATTTGGGACTCAAGATGTGATGAT AGTTGGTGGGTCAGAGGCGGCCATAACCAAGTTTGCCATTGCTGGCTTCCAAAGTTTAACAGCTCTCTCAACAACTGAAG ATCCAAGCAGAAGCTCTATTCCATTTGATAAAGACCGCAATGGTTTTATCATGGGAGAAGGATCAGGAATGCTTGTTTTA GAAAGCCTAGAACATGCGCAAGAACGCGGGGCGACAATCTTAGCAGAAATTGTGGGTTATGGAAATACCTGCGATGCCTA CCATATGACATCTCCAAATCCTGAGGGATTAGGAGCTCGTAAAGCCATCCACTTAGCCTTACAAGAAGCTGGTATTGAAG CCAGTGCTATTAATTATGTCAATGCGCACGGAACTTCAACCCCAGCTAATGAAAAAGGAGAGAGTCAAGCAATTGTAGCC GTTCTTGGTAAGGATGTTCCGGTGTCTTCAACAAAATCGTTTACGGGTCACCTTCTTGGAGCAGCAGGCGCTATTGAAGC TATTGCCACTATCGAGGCTATGCGTCATAACTATGTTCCGATGACGGCTGGGACACAAGCTTTATCAGAGGATATCGAAG CAAATGTCATCTTTGGAGAAGGAAAAGAAACAGCTATCAACTATGCCATTTCAAATACTTTTGGATTTGGTGGTCATAAT GCTGTATTAGCTTTCAAATGTTGGGAGGAGTAG
Upstream 100 bases:
>100_bases TTGCTCACTTAGCAAGCTTCTTGGTGGAACAAGATTATATTACGGGACAAGTTATCGCTATTGATGGCGGTATGACAATG CAATAAGGAGACGTAGTGAA
Downstream 100 bases:
>100_bases GTTGAATATTCAAGAAATCAAAGATTTGATGGCTCAGTTTGATACCTCAAGCCTACGTGAATTTTTATTCAAAACAAATG AAGGTGAGCTAATCTTTAGT
Product: 3-oxoacyl-(acyl carrier protein) synthase II
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase II; Beta-ketoacyl-ACP synthase II; KAS II [H]
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTFKRVVVTGYGLTSPIGHDPETFWNNLKAGQIGIGPITKFDTTDYAVKNAAEIQDFPFDKYFVKKDLNRFDRYSLYALY AAKEAINHADLNIEMVDSDRFGVIVASGIGGIAEIEEQVIRLHEKGPKRVKPMTLPKALPNMAAGNVAMSLKAQGVCKSI NTACASSNDAIGDAFRAIKFGTQDVMIVGGSEAAITKFAIAGFQSLTALSTTEDPSRSSIPFDKDRNGFIMGEGSGMLVL ESLEHAQERGATILAEIVGYGNTCDAYHMTSPNPEGLGARKAIHLALQEAGIEASAINYVNAHGTSTPANEKGESQAIVA VLGKDVPVSSTKSFTGHLLGAAGAIEAIATIEAMRHNYVPMTAGTQALSEDIEANVIFGEGKETAINYAISNTFGFGGHN AVLAFKCWEE
Sequences:
>Translated_410_residues MTFKRVVVTGYGLTSPIGHDPETFWNNLKAGQIGIGPITKFDTTDYAVKNAAEIQDFPFDKYFVKKDLNRFDRYSLYALY AAKEAINHADLNIEMVDSDRFGVIVASGIGGIAEIEEQVIRLHEKGPKRVKPMTLPKALPNMAAGNVAMSLKAQGVCKSI NTACASSNDAIGDAFRAIKFGTQDVMIVGGSEAAITKFAIAGFQSLTALSTTEDPSRSSIPFDKDRNGFIMGEGSGMLVL ESLEHAQERGATILAEIVGYGNTCDAYHMTSPNPEGLGARKAIHLALQEAGIEASAINYVNAHGTSTPANEKGESQAIVA VLGKDVPVSSTKSFTGHLLGAAGAIEAIATIEAMRHNYVPMTAGTQALSEDIEANVIFGEGKETAINYAISNTFGFGGHN AVLAFKCWEE >Mature_409_residues TFKRVVVTGYGLTSPIGHDPETFWNNLKAGQIGIGPITKFDTTDYAVKNAAEIQDFPFDKYFVKKDLNRFDRYSLYALYA AKEAINHADLNIEMVDSDRFGVIVASGIGGIAEIEEQVIRLHEKGPKRVKPMTLPKALPNMAAGNVAMSLKAQGVCKSIN TACASSNDAIGDAFRAIKFGTQDVMIVGGSEAAITKFAIAGFQSLTALSTTEDPSRSSIPFDKDRNGFIMGEGSGMLVLE SLEHAQERGATILAEIVGYGNTCDAYHMTSPNPEGLGARKAIHLALQEAGIEASAINYVNAHGTSTPANEKGESQAIVAV LGKDVPVSSTKSFTGHLLGAAGAIEAIATIEAMRHNYVPMTAGTQALSEDIEANVIFGEGKETAINYAISNTFGFGGHNA VLAFKCWEE
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP [H]
COG id: COG0304
COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-ketoacyl-ACP synthases family [H]
Homologues:
Organism=Homo sapiens, GI8923559, Length=417, Percent_Identity=36.9304556354916, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI223972627, Length=148, Percent_Identity=40.5405405405405, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI41872631, Length=419, Percent_Identity=24.582338902148, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1787337, Length=411, Percent_Identity=45.2554744525547, Blast_Score=311, Evalue=5e-86, Organism=Escherichia coli, GI1788663, Length=413, Percent_Identity=34.8668280871671, Blast_Score=204, Evalue=7e-54, Organism=Caenorhabditis elegans, GI71983541, Length=408, Percent_Identity=36.7647058823529, Blast_Score=241, Evalue=4e-64, Organism=Caenorhabditis elegans, GI71983535, Length=259, Percent_Identity=41.3127413127413, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17550940, Length=265, Percent_Identity=30.188679245283, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI212642053, Length=363, Percent_Identity=25.068870523416, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320904, Length=443, Percent_Identity=37.9232505643341, Blast_Score=285, Evalue=9e-78, Organism=Drosophila melanogaster, GI24644341, Length=417, Percent_Identity=39.8081534772182, Blast_Score=283, Evalue=1e-76, Organism=Drosophila melanogaster, GI19920632, Length=364, Percent_Identity=25.5494505494505, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI221330659, Length=364, Percent_Identity=25.5494505494505, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24581345, Length=363, Percent_Identity=23.4159779614325, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017568 - InterPro: IPR000794 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C [H]
EC number: =2.3.1.179 [H]
Molecular weight: Translated: 43652; Mature: 43521
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00098 THIOLASE_1 ; PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKRVVVTGYGLTSPIGHDPETFWNNLKAGQIGIGPITKFDTTDYAVKNAAEIQDFPFD CCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCH KYFVKKDLNRFDRYSLYALYAAKEAINHADLNIEMVDSDRFGVIVASGIGGIAEIEEQVI HHHHHHHHHHHHHHHEEEEEHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHH RLHEKGPKRVKPMTLPKALPNMAAGNVAMSLKAQGVCKSINTACASSNDAIGDAFRAIKF HHHHCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHC GTQDVMIVGGSEAAITKFAIAGFQSLTALSTTEDPSRSSIPFDKDRNGFIMGEGSGMLVL CCCEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEE ESLEHAQERGATILAEIVGYGNTCDAYHMTSPNPEGLGARKAIHLALQEAGIEASAINYV HHHHHHHHCCCEEEHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCHHEEEE NAHGTSTPANEKGESQAIVAVLGKDVPVSSTKSFTGHLLGAAGAIEAIATIEAMRHNYVP ECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC MTAGTQALSEDIEANVIFGEGKETAINYAISNTFGFGGHNAVLAFKCWEE CCCCHHHHHHCCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEECCC >Mature Secondary Structure TFKRVVVTGYGLTSPIGHDPETFWNNLKAGQIGIGPITKFDTTDYAVKNAAEIQDFPFD CCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCH KYFVKKDLNRFDRYSLYALYAAKEAINHADLNIEMVDSDRFGVIVASGIGGIAEIEEQVI HHHHHHHHHHHHHHHEEEEEHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHH RLHEKGPKRVKPMTLPKALPNMAAGNVAMSLKAQGVCKSINTACASSNDAIGDAFRAIKF HHHHCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHC GTQDVMIVGGSEAAITKFAIAGFQSLTALSTTEDPSRSSIPFDKDRNGFIMGEGSGMLVL CCCEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEE ESLEHAQERGATILAEIVGYGNTCDAYHMTSPNPEGLGARKAIHLALQEAGIEASAINYV HHHHHHHHCCCEEEHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCHHEEEE NAHGTSTPANEKGESQAIVAVLGKDVPVSSTKSFTGHLLGAAGAIEAIATIEAMRHNYVP ECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC MTAGTQALSEDIEANVIFGEGKETAINYAISNTFGFGGHNAVLAFKCWEE CCCCHHHHHHCCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]