Click here to switch to the map view.

The map label for this gene is ydiB [H]

Identifier: 15675584

GI number: 15675584

Start: 1436384

End: 1436845

Strand: Reverse

Name: ydiB [H]

Synonym: SPy_1735

Alternate gene names: 15675584

Gene position: 1436845-1436384 (Counterclockwise)

Preceding gene: 15675585

Following gene: 15675583

Centisome position: 77.56

GC content: 37.66

Gene sequence:

>462_bases
ATGTTTTATAGTGAAAATGAATATACTCTTAAAGCTTACGGAGAAACCCTAGGTACTTATTTGTCTATTGGAGATGTGAT
TGTATTGTCTGGCGACTTAGGTGCCGGTAAAACAACATTGGCAAAAGGTATTGCTAAAGGGATGGGGATTAGTCAAATGA
TCAAAAGCCCAACTTATACTATTGTTAGAGAATATGAAGGACGTCTACCTCTTTATCACTTAGATATTTACCGTGTTGGT
GATGATCCAGACTCTATTGATTTAGATGATTTTCTTTTTGGTAATGGTGTTACCGTTATTGAGTGGGGAGAATTATTAGG
AGAGGGATTATTACAAGACTATTTGCAAATTACCATTACTAAACGAGACAAAGGTCGTCAACTAGACTTGTTAGCGCATG
GTGAGCGCTCTCGTCAGCTTCTGGAGATAATGTCACATGGTTCAGCAAAGTCTCGTTATTGA

Upstream 100 bases:

>100_bases
CCTTTAATATAAAGAAGCGTTTTTACTTTACGAATACCTTATTGGAGTCATCTTCTAGGTAGTGCTTGGAAGTATGTTTT
TTTTCTGATATAATGTTGCT

Downstream 100 bases:

>100_bases
AGAAGGCGTACCTCAAGATGCAAAAGCTGTACTTTCCTTAGTGACGGCAGCTGCCAAAGAAACAGATTTTATAACAGGCG
TAGAGACTATATTAGAGGCT

Product: ATP/GTP hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MFYSENEYTLKAYGETLGTYLSIGDVIVLSGDLGAGKTTLAKGIAKGMGISQMIKSPTYTIVREYEGRLPLYHLDIYRVG
DDPDSIDLDDFLFGNGVTVIEWGELLGEGLLQDYLQITITKRDKGRQLDLLAHGERSRQLLEIMSHGSAKSRY

Sequences:

>Translated_153_residues
MFYSENEYTLKAYGETLGTYLSIGDVIVLSGDLGAGKTTLAKGIAKGMGISQMIKSPTYTIVREYEGRLPLYHLDIYRVG
DDPDSIDLDDFLFGNGVTVIEWGELLGEGLLQDYLQITITKRDKGRQLDLLAHGERSRQLLEIMSHGSAKSRY
>Mature_153_residues
MFYSENEYTLKAYGETLGTYLSIGDVIVLSGDLGAGKTTLAKGIAKGMGISQMIKSPTYTIVREYEGRLPLYHLDIYRVG
DDPDSIDLDDFLFGNGVTVIEWGELLGEGLLQDYLQITITKRDKGRQLDLLAHGERSRQLLEIMSHGSAKSRY

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=119, Percent_Identity=36.1344537815126, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17043; Mature: 17043

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYSENEYTLKAYGETLGTYLSIGDVIVLSGDLGAGKTTLAKGIAKGMGISQMIKSPTYT
CCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCEE
IVREYEGRLPLYHLDIYRVGDDPDSIDLDDFLFGNGVTVIEWGELLGEGLLQDYLQITIT
EEEECCCCCCEEEEEEEEECCCCCCCCCCHHHCCCCEEEEEHHHHHHHHHHHHHHEEEEE
KRDKGRQLDLLAHGERSRQLLEIMSHGSAKSRY
ECCCCCEEEEEECCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFYSENEYTLKAYGETLGTYLSIGDVIVLSGDLGAGKTTLAKGIAKGMGISQMIKSPTYT
CCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCEE
IVREYEGRLPLYHLDIYRVGDDPDSIDLDDFLFGNGVTVIEWGELLGEGLLQDYLQITIT
EEEECCCCCCEEEEEEEEECCCCCCCCCCHHHCCCCEEEEEHHHHHHHHHHHHHHEEEEE
KRDKGRQLDLLAHGERSRQLLEIMSHGSAKSRY
ECCCCCEEEEEECCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]