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The map label for this gene is int2 [H]

Identifier: 15675393

GI number: 15675393

Start: 1221407

End: 1222549

Strand: Direct

Name: int2 [H]

Synonym: SPy_1488

Alternate gene names: 15675393

Gene position: 1221407-1222549 (Clockwise)

Preceding gene: 15675392

Following gene: 15675411

Centisome position: 65.94

GC content: 35.7

Gene sequence:

>1143_bases
ATGTGGATAGAAGAAACTGATAACGGTAAATTCAAATTTCGTGAAAATTATAAAGATCCTTACACTGGAACATGGAAACC
TGTATCCGTTACTATGGAGAAGGATAATTCAAGAGCTTATAAAGCAGCTCGAAAAATCCTTGAACAAAAAATAACAGAAA
AAATAGCGCAATTAAAGGCCTCTGAGTTACTTTTCACGGAACTTTTAGATGAATGGTGGGCGTTTTATAAGAAAGAACTT
AAAAGGTCGTCTGTAGCTTCTCTGAGAGGTAATATCGAAGAGATAAGGGAAACTTTTGGAATAGGTGTTAAAGTAGTGAA
TATTGATCCTAAATACGTTCAGAATTATCTCGATAACCTAGATTGCTCTAGGAATAAAAAAGAGCGTAATAAGTCTATGC
TAAACTTAGCATTTGATTATGCTGTTGGTTTGGATATTATCCAAGATAATCCTGCAAGACGTGCTAAACTCCCAAGGGTA
AAGAAAACTCTTGAAGACTGGAAAAAGGCTGAAGAAAAATATCTTGAAGAAGATGAAATTAAACCATTATTGAAAGAATT
GTACAGAAGACCTAGCACTTACCGACTTGGTTTGTTGGCTGAGTTTATCAGTTTGAACGGTTGTCGTATCGGTGAAGCTG
TCAGCATTGAGCCGTGCAACTACGAATCTAAGTCAAGAATATTGCAGTTGCACGGAACATTTGATCATACGGAAGGATAT
CGTAACGGGGAAAAGACAGCGCCCAAGACATTAGCTTCTTATCGTGAAACCATCATGACAAGTAGAGAACTTGAAATTCT
ACAAGAGTTAGAATTTATGAACGAACTAGAAAAAAATACAAATCATAGATATAGAGATATGGGATACCTTTTTACAACAA
AAAACGGTGTTCCAATTCAGACTAACTCATTCAACTTAGCTTTAAAAAAAGCTAATGAAAGATTGGAAGACCCAATTACA
AAAAAACTTACTAGCCACATCTTCCGTCACACTCTTATTAGCCGTCTAGCAGAGAATAACGTGCCGCTAAAATCAATCAT
GGAACGTGTAGGACATGCAGACGCTAAAACTACTGCCCAAATTTATACTCATGTCACAAAGAAAATGAAATCAAGTGTAG
CTGATATTATGGAAAACTATTAA

Upstream 100 bases:

>100_bases
TGGCGAGGAGAGCGTGAGGCGAATCTAGTATAGTAAAAACCTGCTTCGCAGTAGGTCTCTTTACTATACCTATTTTAACA
GAAAATGAGGTAAAAAACAA

Downstream 100 bases:

>100_bases
ATTTTTTACCCCTTTTTTACCCCCTGAACACAAAAAAGCCCACTGCACAGGCTACAACGCTTGTACAATGGGCTTTTATA
TATGCAATTATTTAACAGCG

Product: putative integrase

Products: NA

Alternate protein names: Int-TnX [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MWIEETDNGKFKFRENYKDPYTGTWKPVSVTMEKDNSRAYKAARKILEQKITEKIAQLKASELLFTELLDEWWAFYKKEL
KRSSVASLRGNIEEIRETFGIGVKVVNIDPKYVQNYLDNLDCSRNKKERNKSMLNLAFDYAVGLDIIQDNPARRAKLPRV
KKTLEDWKKAEEKYLEEDEIKPLLKELYRRPSTYRLGLLAEFISLNGCRIGEAVSIEPCNYESKSRILQLHGTFDHTEGY
RNGEKTAPKTLASYRETIMTSRELEILQELEFMNELEKNTNHRYRDMGYLFTTKNGVPIQTNSFNLALKKANERLEDPIT
KKLTSHIFRHTLISRLAENNVPLKSIMERVGHADAKTTAQIYTHVTKKMKSSVADIMENY

Sequences:

>Translated_380_residues
MWIEETDNGKFKFRENYKDPYTGTWKPVSVTMEKDNSRAYKAARKILEQKITEKIAQLKASELLFTELLDEWWAFYKKEL
KRSSVASLRGNIEEIRETFGIGVKVVNIDPKYVQNYLDNLDCSRNKKERNKSMLNLAFDYAVGLDIIQDNPARRAKLPRV
KKTLEDWKKAEEKYLEEDEIKPLLKELYRRPSTYRLGLLAEFISLNGCRIGEAVSIEPCNYESKSRILQLHGTFDHTEGY
RNGEKTAPKTLASYRETIMTSRELEILQELEFMNELEKNTNHRYRDMGYLFTTKNGVPIQTNSFNLALKKANERLEDPIT
KKLTSHIFRHTLISRLAENNVPLKSIMERVGHADAKTTAQIYTHVTKKMKSSVADIMENY
>Mature_380_residues
MWIEETDNGKFKFRENYKDPYTGTWKPVSVTMEKDNSRAYKAARKILEQKITEKIAQLKASELLFTELLDEWWAFYKKEL
KRSSVASLRGNIEEIRETFGIGVKVVNIDPKYVQNYLDNLDCSRNKKERNKSMLNLAFDYAVGLDIIQDNPARRAKLPRV
KKTLEDWKKAEEKYLEEDEIKPLLKELYRRPSTYRLGLLAEFISLNGCRIGEAVSIEPCNYESKSRILQLHGTFDHTEGY
RNGEKTAPKTLASYRETIMTSRELEILQELEFMNELEKNTNHRYRDMGYLFTTKNGVPIQTNSFNLALKKANERLEDPIT
KKLTSHIFRHTLISRLAENNVPLKSIMERVGHADAKTTAQIYTHVTKKMKSSVADIMENY

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44343; Mature: 44343

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWIEETDNGKFKFRENYKDPYTGTWKPVSVTMEKDNSRAYKAARKILEQKITEKIAQLKA
CCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
SELLFTELLDEWWAFYKKELKRSSVASLRGNIEEIRETFGIGVKVVNIDPKYVQNYLDNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCHHHHHHHHHCC
DCSRNKKERNKSMLNLAFDYAVGLDIIQDNPARRAKLPRVKKTLEDWKKAEEKYLEEDEI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHH
KPLLKELYRRPSTYRLGLLAEFISLNGCRIGEAVSIEPCNYESKSRILQLHGTFDHTEGY
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHCEEEEECCCCCCCCC
RNGEKTAPKTLASYRETIMTSRELEILQELEFMNELEKNTNHRYRDMGYLFTTKNGVPIQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCEE
TNSFNLALKKANERLEDPITKKLTSHIFRHTLISRLAENNVPLKSIMERVGHADAKTTAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHH
IYTHVTKKMKSSVADIMENY
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWIEETDNGKFKFRENYKDPYTGTWKPVSVTMEKDNSRAYKAARKILEQKITEKIAQLKA
CCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
SELLFTELLDEWWAFYKKELKRSSVASLRGNIEEIRETFGIGVKVVNIDPKYVQNYLDNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCHHHHHHHHHCC
DCSRNKKERNKSMLNLAFDYAVGLDIIQDNPARRAKLPRVKKTLEDWKKAEEKYLEEDEI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHH
KPLLKELYRRPSTYRLGLLAEFISLNGCRIGEAVSIEPCNYESKSRILQLHGTFDHTEGY
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHCEEEEECCCCCCCCC
RNGEKTAPKTLASYRETIMTSRELEILQELEFMNELEKNTNHRYRDMGYLFTTKNGVPIQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCEE
TNSFNLALKKANERLEDPITKKLTSHIFRHTLISRLAENNVPLKSIMERVGHADAKTTAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHH
IYTHVTKKMKSSVADIMENY
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10532372; 11337471 [H]