Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is pyrD
Identifier: 15675344
GI number: 15675344
Start: 1185686
End: 1186621
Strand: Direct
Name: pyrD
Synonym: SPy_1432
Alternate gene names: 15675344
Gene position: 1185686-1186621 (Clockwise)
Preceding gene: 15675332
Following gene: 15675346
Centisome position: 64.01
GC content: 41.45
Gene sequence:
>936_bases ATGGTTTCTACTGCTACACAAATTGGTCATTTCTCTTTTGATAACTGTTTGATGAATGCTGCTGGTGTTTACTGCATGAC AAAAGAAGAGCTTATGGAGGTTGAAAAGTCTCAAGCCGCTTCCTTTGTCACCAAAACAGGGACGCTTGAAGTTCGTCCAG GTAATCCAGAACCTCGCTACGCAGATACTCGTCTTGGTTCTATCAATTCAATGGGACTCCCTAATAATGGTTTTCGCTAC TACTTAGACTTTGTCAGTGATCTTGCCAAAACCGGGCAACATAAACCTCACTTTCTCTCCGTTGTCGGGCTATCTCCTAC TGAAACCGAAACCATTTTAAAAGCCATCATGGCTTCAGATTATGAGGGTCTAGTGGAACTAAACCTTTCTTGCCCTAACG TTCCAGGAAAACCACAGATTGCTTATGATTTTGAAACCACTGATCAACTTCTAGAGAACATCTTTACCTATTACACTAAA CCTCTTGGTATCAAATTACCTCCTTATTTTGACATTGTGCATTTTGATCAAGCGGCTGCGATTTTCAATAAATACCCCCT TTCCTTTGTTAACTGTGTCAATTCTATCGGAAATGGGCTGGTCATTAAGGATGAACAAGTCCTCATCAAGCCTAAAAATG GCTTTGGTGGTATAGGTGGAGATTACATCAAACCTACTGCTCTAGCCAATGTCCATGCGTTTTACAAACGCTTAAAACCT TCTATCCACATTATTGGTACAGGGGGAGTTAAAACAGGACGCGATGCCTTTGAACATATTCTTTGTGGCGCCAGCATGGT CCAAATTGGGACAGCCCTTCATCAAGAAGGGCCAGCTATCTTTGAACGGGTCACTAAGGAACTTAAAACGATTATGGTAG AAAAAGGCTACCAAAGCTTAGACGATTTTCGTGGGAACTTACGTTACAAAGATTAA
Upstream 100 bases:
>100_bases TCAATAACAGTAATATATTTACATTTTTGTAAAAATAGCTTGCTATTATTCATGCCTAGTGGTAGAATAGAAAAAATTTG TCTAAAATATGGAGGAAATA
Downstream 100 bases:
>100_bases CCTTAATAGTCAAAAAAGCTTGGAAATGTGCACTTTGTACACTTTCCAAGCTTTTTAAAATGGGAATTTTTTTGAAGGGA CAGCGTCACTTTCTTGGGAC
Product: dihydroorotate dehydrogenase 1A
Products: NA
Alternate protein names: DHOdehase; DHOD; DHODase; Dihydroorotate oxidase
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MVSTATQIGHFSFDNCLMNAAGVYCMTKEELMEVEKSQAASFVTKTGTLEVRPGNPEPRYADTRLGSINSMGLPNNGFRY YLDFVSDLAKTGQHKPHFLSVVGLSPTETETILKAIMASDYEGLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTK PLGIKLPPYFDIVHFDQAAAIFNKYPLSFVNCVNSIGNGLVIKDEQVLIKPKNGFGGIGGDYIKPTALANVHAFYKRLKP SIHIIGTGGVKTGRDAFEHILCGASMVQIGTALHQEGPAIFERVTKELKTIMVEKGYQSLDDFRGNLRYKD
Sequences:
>Translated_311_residues MVSTATQIGHFSFDNCLMNAAGVYCMTKEELMEVEKSQAASFVTKTGTLEVRPGNPEPRYADTRLGSINSMGLPNNGFRY YLDFVSDLAKTGQHKPHFLSVVGLSPTETETILKAIMASDYEGLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTK PLGIKLPPYFDIVHFDQAAAIFNKYPLSFVNCVNSIGNGLVIKDEQVLIKPKNGFGGIGGDYIKPTALANVHAFYKRLKP SIHIIGTGGVKTGRDAFEHILCGASMVQIGTALHQEGPAIFERVTKELKTIMVEKGYQSLDDFRGNLRYKD >Mature_311_residues MVSTATQIGHFSFDNCLMNAAGVYCMTKEELMEVEKSQAASFVTKTGTLEVRPGNPEPRYADTRLGSINSMGLPNNGFRY YLDFVSDLAKTGQHKPHFLSVVGLSPTETETILKAIMASDYEGLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTK PLGIKLPPYFDIVHFDQAAAIFNKYPLSFVNCVNSIGNGLVIKDEQVLIKPKNGFGGIGGDYIKPTALANVHAFYKRLKP SIHIIGTGGVKTGRDAFEHILCGASMVQIGTALHQEGPAIFERVTKELKTIMVEKGYQSLDDFRGNLRYKD
Specific function: Unknown
COG id: COG0167
COG function: function code F; Dihydroorotate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI87082059, Length=215, Percent_Identity=26.046511627907, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322633, Length=309, Percent_Identity=58.252427184466, Blast_Score=380, Evalue=1e-106, Organism=Drosophila melanogaster, GI281361352, Length=281, Percent_Identity=27.7580071174377, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI17137316, Length=281, Percent_Identity=27.7580071174377, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PYRD_STRP1 (Q99Z28)
Other databases:
- EMBL: AE004092 - EMBL: CP000017 - RefSeq: NP_269518.1 - RefSeq: YP_282528.1 - HSSP: P54321 - ProteinModelPortal: Q99Z28 - SMR: Q99Z28 - EnsemblBacteria: EBSTRT00000001327 - EnsemblBacteria: EBSTRT00000028287 - GeneID: 3571750 - GeneID: 901488 - GenomeReviews: AE004092_GR - GenomeReviews: CP000017_GR - KEGG: spy:SPy_1432 - KEGG: spz:M5005_Spy_1165 - GeneTree: EBGT00050000027667 - HOGENOM: HBG472415 - OMA: KPLGVKL - ProtClustDB: PRK02506 - BioCyc: SPYO160490:SPY1432-MONOMER - BioCyc: SPYO293653:M5005_SPY1165-MONOMER - GO: GO:0005737 - HAMAP: MF_00224_B - InterPro: IPR013785 - InterPro: IPR005720 - InterPro: IPR012135 - InterPro: IPR001295 - Gene3D: G3DSA:3.20.20.70 - PIRSF: PIRSF000164 - TIGRFAMs: TIGR01037
Pfam domain/function: PF01180 DHO_dh
EC number: =1.3.3.1
Molecular weight: Translated: 34323; Mature: 34323
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00911 DHODEHASE_1; PS00912 DHODEHASE_2
Important sites: ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTATQIGHFSFDNCLMNAAGVYCMTKEELMEVEKSQAASFVTKTGTLEVRPGNPEPRY CCCCCHHHCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHHEEECCEEEEECCCCCCCC ADTRLGSINSMGLPNNGFRYYLDFVSDLAKTGQHKPHFLSVVGLSPTETETILKAIMASD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCC YEGLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTKPLGIKLPPYFDIVHFDQAAA CCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHH IFNKYPLSFVNCVNSIGNGLVIKDEQVLIKPKNGFGGIGGDYIKPTALANVHAFYKRLKP HHHHCCHHHHHHHHHHCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCC SIHIIGTGGVKTGRDAFEHILCGASMVQIGTALHQEGPAIFERVTKELKTIMVEKGYQSL CEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHH DDFRGNLRYKD HHHCCCCCCCC >Mature Secondary Structure MVSTATQIGHFSFDNCLMNAAGVYCMTKEELMEVEKSQAASFVTKTGTLEVRPGNPEPRY CCCCCHHHCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHHHEEECCEEEEECCCCCCCC ADTRLGSINSMGLPNNGFRYYLDFVSDLAKTGQHKPHFLSVVGLSPTETETILKAIMASD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCC YEGLVELNLSCPNVPGKPQIAYDFETTDQLLENIFTYYTKPLGIKLPPYFDIVHFDQAAA CCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHH IFNKYPLSFVNCVNSIGNGLVIKDEQVLIKPKNGFGGIGGDYIKPTALANVHAFYKRLKP HHHHCCHHHHHHHHHHCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCC SIHIIGTGGVKTGRDAFEHILCGASMVQIGTALHQEGPAIFERVTKELKTIMVEKGYQSL CEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHH DDFRGNLRYKD HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11296296