Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
---|---|
Accession | NC_002737 |
Length | 1,852,441 |
Click here to switch to the map view.
The map label for this gene is yrhG [H]
Identifier: 15675340
GI number: 15675340
Start: 1182518
End: 1183297
Strand: Reverse
Name: yrhG [H]
Synonym: SPy_1424
Alternate gene names: 15675340
Gene position: 1183297-1182518 (Counterclockwise)
Preceding gene: 15675341
Following gene: 15675339
Centisome position: 63.88
GC content: 37.95
Gene sequence:
>780_bases ATGAAAACACCAGAACAGATTTTAGAAGCAACTATTCATATTGGGGAACATAAGGTTACCAAAACTTTTTTGGCTAAATC TATCTTAGGCTTTATTGGTGGAGCGATGATTAGCCTTGGTTATTTACTATACGTGAGAATTGCCGCCAGTGGTTTAGAAA CTTTTGGTGCTTTTTCCAGTATCGTAGGAGCTTGTGCTTTTCCGATTGGTCTAATTATTATTTTAATGGCGGGTGGAGAA TTAATTACAGGGAACATGATGGCTGTTTCTGCAGCTTTGTTGGCCAAAAAAATTAAGTTTAGCGAGCTTGCCAAGAATTG GCTTATCATTACCTTGTTTAATGTGATTGGAGCTGTTTTTGTAGCTTTTGTGTTTGGTCATTTTCTAGGCTTAACATCAG CTGGTATTTTTAAAGAAGAAGTGATTGAGGTGGCCCATGCTAAAATAGCAGCGAGCCCTTTGCAGGCACTAGTATCAGGA ATTGGTTGTAACTGGTTTGTTGGTTTGGCCTTGTGGCTATGCTATGGGGCAAATGATGCTGCTGGTAAATTCCTTGGTAC TTGGTTTCCTGTCATGACCTTTGTAGCCCTTGGTTTTCAGCATAGTGTAGCAAATGCTTTTGTCATTCCTGCTGCTATTT TTGAAGGAGGAGCAACATGGTTGGATTTTGTCACTAATTTTATTTTTGTCTATAGTGGTAATATTATCGGTGGAGCCATT TTTGTTAGTTTTTTATATTTTAAAGTTTACTATCATCCGCAAAAGAGTAAAACTCAATGA
Upstream 100 bases:
>100_bases GATAATGACGAGCCCTTTCTTGTTGAAAGGGCTTGCATTTTTTAGGAAAATTGATATACTAAAGTGTGTGTTTGTGAATA CAGTAACAAAAGGAGATATC
Downstream 100 bases:
>100_bases GAAAATATTTTTTTAGACTGAGGGCGTCCTATTCTCAGTCTTCTTTTTATAATTTATGGTAAAATAAGAAGCGAAGTTTA AAAAATTTAGCTAAATAATG
Product: putative formate dehydrogenase
Products: formate [Periplasm]; formate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKTPEQILEATIHIGEHKVTKTFLAKSILGFIGGAMISLGYLLYVRIAASGLETFGAFSSIVGACAFPIGLIIILMAGGE LITGNMMAVSAALLAKKIKFSELAKNWLIITLFNVIGAVFVAFVFGHFLGLTSAGIFKEEVIEVAHAKIAASPLQALVSG IGCNWFVGLALWLCYGANDAAGKFLGTWFPVMTFVALGFQHSVANAFVIPAAIFEGGATWLDFVTNFIFVYSGNIIGGAI FVSFLYFKVYYHPQKSKTQ
Sequences:
>Translated_259_residues MKTPEQILEATIHIGEHKVTKTFLAKSILGFIGGAMISLGYLLYVRIAASGLETFGAFSSIVGACAFPIGLIIILMAGGE LITGNMMAVSAALLAKKIKFSELAKNWLIITLFNVIGAVFVAFVFGHFLGLTSAGIFKEEVIEVAHAKIAASPLQALVSG IGCNWFVGLALWLCYGANDAAGKFLGTWFPVMTFVALGFQHSVANAFVIPAAIFEGGATWLDFVTNFIFVYSGNIIGGAI FVSFLYFKVYYHPQKSKTQ >Mature_259_residues MKTPEQILEATIHIGEHKVTKTFLAKSILGFIGGAMISLGYLLYVRIAASGLETFGAFSSIVGACAFPIGLIIILMAGGE LITGNMMAVSAALLAKKIKFSELAKNWLIITLFNVIGAVFVAFVFGHFLGLTSAGIFKEEVIEVAHAKIAASPLQALVSG IGCNWFVGLALWLCYGANDAAGKFLGTWFPVMTFVALGFQHSVANAFVIPAAIFEGGATWLDFVTNFIFVYSGNIIGGAI FVSFLYFKVYYHPQKSKTQ
Specific function: Involved In The Bidirectional Transport Of Formate. [C]
COG id: COG2116
COG function: function code P; Formate/nitrite family of transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FNT transporter (TC 2.A.44) family [H]
Homologues:
Organism=Escherichia coli, GI1787132, Length=276, Percent_Identity=30.0724637681159, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1788837, Length=268, Percent_Identity=27.6119402985075, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082249, Length=244, Percent_Identity=28.6885245901639, Blast_Score=75, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6321779, Length=240, Percent_Identity=29.5833333333333, Blast_Score=89, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000292 [H]
Pfam domain/function: PF01226 Form_Nir_trans [H]
EC number: NA
Molecular weight: Translated: 27755; Mature: 27755
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS00213 LIPOCALIN ; PS01005 FORMATE_NITRITE_TP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPEQILEATIHIGEHKVTKTFLAKSILGFIGGAMISLGYLLYVRIAASGLETFGAFSS CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVGACAFPIGLIIILMAGGELITGNMMAVSAALLAKKIKFSELAKNWLIITLFNVIGAVF HHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFVFGHFLGLTSAGIFKEEVIEVAHAKIAASPLQALVSGIGCNWFVGLALWLCYGANDA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCH AGKFLGTWFPVMTFVALGFQHSVANAFVIPAAIFEGGATWLDFVTNFIFVYSGNIIGGAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH FVSFLYFKVYYHPQKSKTQ HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKTPEQILEATIHIGEHKVTKTFLAKSILGFIGGAMISLGYLLYVRIAASGLETFGAFSS CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVGACAFPIGLIIILMAGGELITGNMMAVSAALLAKKIKFSELAKNWLIITLFNVIGAVF HHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFVFGHFLGLTSAGIFKEEVIEVAHAKIAASPLQALVSGIGCNWFVGLALWLCYGANDA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCH AGKFLGTWFPVMTFVALGFQHSVANAFVIPAAIFEGGATWLDFVTNFIFVYSGNIIGGAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH FVSFLYFKVYYHPQKSKTQ HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formate [Cytoplasm]; formate [Periplasm] [C]
Specific reaction: formate [Cytoplasm] = formate [Periplasm] formate [Periplasm] = formate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377 [H]