Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ygzD [H]
Identifier: 15675312
GI number: 15675312
Start: 1149506
End: 1149721
Strand: Reverse
Name: ygzD [H]
Synonym: SPy_1386
Alternate gene names: 15675312
Gene position: 1149721-1149506 (Counterclockwise)
Preceding gene: 15675313
Following gene: 15675311
Centisome position: 62.07
GC content: 42.13
Gene sequence:
>216_bases ATGGAGGTTATTCTTAAAAATCGGCTCAAAGAATTACGAGCTAGAGATGGAATTAATCAAACGGAAATGGCTAAACTGGC AGGAGTATCGAGGCAGACCATCAGTCTCATTGAGCGTAACGAGTACACCCCATCAGTTATAATTGCCATGAAAATTGCAA AGGTATTTCAGGAACCAGTTGAAGAGGTGTTTCGTCTAGTGGAGGTCGAGGAATGA
Upstream 100 bases:
>100_bases TTATCTGGTTTTGGGCTTTACAGGACTAGCCTTGCTGTTGAATACTTTTTCTTATTTTAGAAAGTAAGTTATAAGTTAAA GGAGAATGAAGGAGATGGCA
Downstream 100 bases:
>100_bases AAAAGAAGAAGAATAGTTTTTTACGCTTGTTAAAAATGTCATTGCTATCAAGTTTGGCGGGAGGGATTATAGGTGGCATG GTTGGAGCCTTTTTAGGTTA
Product: putative transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MEVILKNRLKELRARDGINQTEMAKLAGVSRQTISLIERNEYTPSVIIAMKIAKVFQEPVEEVFRLVEVEE
Sequences:
>Translated_71_residues MEVILKNRLKELRARDGINQTEMAKLAGVSRQTISLIERNEYTPSVIIAMKIAKVFQEPVEEVFRLVEVEE >Mature_71_residues MEVILKNRLKELRARDGINQTEMAKLAGVSRQTISLIERNEYTPSVIIAMKIAKVFQEPVEEVFRLVEVEE
Specific function: Unknown
COG id: COG1476
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 8202; Mature: 8202
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVILKNRLKELRARDGINQTEMAKLAGVSRQTISLIERNEYTPSVIIAMKIAKVFQEPV CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EEVFRLVEVEE HHHHHHHHCCC >Mature Secondary Structure MEVILKNRLKELRARDGINQTEMAKLAGVSRQTISLIERNEYTPSVIIAMKIAKVFQEPV CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EEVFRLVEVEE HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]