Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ffh [H]
Identifier: 15675165
GI number: 15675165
Start: 983086
End: 984645
Strand: Reverse
Name: ffh [H]
Synonym: SPy_1200
Alternate gene names: 15675165
Gene position: 984645-983086 (Counterclockwise)
Preceding gene: 15675166
Following gene: 15675163
Centisome position: 53.15
GC content: 40.06
Gene sequence:
>1560_bases ATGGCTTTTGAAAGCTTAACCCAACGTTTGCAAGATGTGTTTAAACACATTCGCGGTAAAAAGAAATTATCAGAATCAGA TGTTCAAGAAGTGACAAAAGAGATTCGTCTAGCTCTTTTAGAAGCCGATGTCGCTTTACCAGTTGTTAAAACCTTTATTA AGCGCGTACGTGAGCGCGCTATTGGCCATGAGATTATTGATACTCTTGATCCAACACAACAAATTCTTAAGATTGTTAAT GAAGAATTAACGAGTATTTTAGGCTCAGAAACTGCAGAGATTGATAAATCTCCAAAAATTCCAACTATTATCATGATGGT CGGTTTGCAAGGGGCTGGTAAAACAACTTTTGCAGGAAAACTCGCTAATAAATTAATTAAAGAAGAAAACGCGCGACCAC TGATGATTGCTGCCGATATTTACCGTCCAGCGGCCATTGATCAGTTAAAAACACTGGGGCAACAAATCAATGTACCTGTT TTTGATATGGGGACAGACCACTCAGCAGTCGATATTGTCAGAAAAGGTTTGGAACAAGCTCGTGAAAACCACAATGACTA TGTCTTGATTGATACTGCGGGTCGCTTGCAAATTGATGAAAAACTGATGGGAGAGCTGCGCGATGTCAAGGCTTTAGCAC AACCAAATGAAATTCTTTTGGTTGTAGATAGCATGATTGGTCAAGAAGCTGCCAATGTAGCCTACGAGTTTAATCATCAG TTGAGCATCACAGGGGTTGTGTTAACAAAGATTGATGGTGATACACGTGGAGGTGCGGCGCTATCTGTCCGTGAAATCAC TGGGAAACCAATTAAATTTACAGGTATTGGTGAAAAAATCACAGATATTGAAACATTTCACCCAGACCGCATGTCCAGTC GGATTTTGGGAATGGGGGATTTGCTTACCCTCATTGAAAAAGCTAGCCAGGAATATGATGAGAAAAAATCCTTAGAGTTA GCTGAAAAAATGCGTGAAAACACCTTTGATTTCAATGATTTTATTGAACAGTTAGATCAAGTGCAAAATATGGGGCCTAT GGAAGACCTCTTGAAAATGATTCCAGGAATGGCTGGTAACCCAGCTTTGGCCAATATCAAAGTTGACGAAAACCAAATTG CTCGCAAACGTGCTATTGTCTCTTCAATGACACCCGCTGAACGTGAAAATCCTGACTTACTAAACCCGAGTCGTCGCCGT CGTATTGCAGCTGGTTCCGGGAACAGCTTTGTAGATAATAAATTTATCAAAGACTTTAACCAAGCCAAAAGCATGATGCA AGGGGTTATGTCGGGCGATATGTCTAAAATGATGAAAGATATGGGTATTAATCCCAATAATCTTCCTAAAAACATGCCTG CTGGTATGCCAGATATGTCTTCCTTAGAAGGAATGATGGGACAAGGTGGTATGCCTGATTTATCTGGCCTTGGTGGTGAT ATGGATATGAGTCAACTATTTGGTAAAGGGTTTAAAGGAAAAATTGGCCAATTTGCCATGAAACAGGCCATGAAACGGCA GGCTAACAAACTAAAAAAAGCAAAGAAAAAACGAAAATAA
Upstream 100 bases:
>100_bases TTGACGACATGATTGCTCACTACCCTCATGATGAGTATTTGCAAGAAAAAATTTCCATTCTAACCAGTATTGACAATAGA GAGTAAGAGGAGTTTTGACT
Downstream 100 bases:
>100_bases AAGAGACGAAAATTTTCGTCTCTTTTTGATGTGAAATTCATTTATCTTGTATACAAGATTATTAAAATTACGGAAGACCG TGTTACATACCATGATGAGT
Product: putative signal recognition particle
Products: NA
Alternate protein names: Fifty-four homolog [H]
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MAFESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVN EELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPV FDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMGELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQ LSITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLEL AEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPDLLNPSRRR RIAAGSGNSFVDNKFIKDFNQAKSMMQGVMSGDMSKMMKDMGINPNNLPKNMPAGMPDMSSLEGMMGQGGMPDLSGLGGD MDMSQLFGKGFKGKIGQFAMKQAMKRQANKLKKAKKKRK
Sequences:
>Translated_519_residues MAFESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVN EELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPV FDMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMGELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQ LSITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLEL AEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPDLLNPSRRR RIAAGSGNSFVDNKFIKDFNQAKSMMQGVMSGDMSKMMKDMGINPNNLPKNMPAGMPDMSSLEGMMGQGGMPDLSGLGGD MDMSQLFGKGFKGKIGQFAMKQAMKRQANKLKKAKKKRK >Mature_518_residues AFESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNE ELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVF DMGTDHSAVDIVRKGLEQARENHNDYVLIDTAGRLQIDEKLMGELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQL SITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPDLLNPSRRRR IAAGSGNSFVDNKFIKDFNQAKSMMQGVMSGDMSKMMKDMGINPNNLPKNMPAGMPDMSSLEGMMGQGGMPDLSGLGGDM DMSQLFGKGFKGKIGQFAMKQAMKRQANKLKKAKKKRK
Specific function: Necessary for efficient export of extracytoplasmic proteins. Binds to the signal sequence when it emerges from the ribosomes [H]
COG id: COG0541
COG function: function code U; Signal recognition particle GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding SRP family [H]
Homologues:
Organism=Homo sapiens, GI4507215, Length=455, Percent_Identity=30.7692307692308, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI226371618, Length=392, Percent_Identity=31.8877551020408, Blast_Score=179, Evalue=8e-45, Organism=Homo sapiens, GI23308697, Length=308, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI295424842, Length=308, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI89061728, Length=146, Percent_Identity=35.6164383561644, Blast_Score=99, Evalue=1e-20, Organism=Escherichia coli, GI1788963, Length=420, Percent_Identity=48.3333333333333, Blast_Score=408, Evalue=1e-115, Organism=Escherichia coli, GI1789874, Length=269, Percent_Identity=33.0855018587361, Blast_Score=145, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17539958, Length=494, Percent_Identity=27.1255060728745, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI193206261, Length=299, Percent_Identity=29.4314381270903, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6325345, Length=466, Percent_Identity=30.2575107296137, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6320498, Length=316, Percent_Identity=25.9493670886076, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI17647949, Length=493, Percent_Identity=29.8174442190669, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24641198, Length=311, Percent_Identity=30.2250803858521, Blast_Score=119, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR000897 - InterPro: IPR013822 - InterPro: IPR004780 - InterPro: IPR004125 [H]
Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N; PF02978 SRP_SPB [H]
EC number: NA
Molecular weight: Translated: 57417; Mature: 57285
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERA CCHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGHEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGK HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCCCCHHHHH LANKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQA HHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH RENHNDYVLIDTAGRLQIDEKLMGELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQ HHCCCCEEEEECCCCCEECHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHEECCE LSITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGD EEEEEEEEEEECCCCCCCCEEEEHCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHCCHHH LLTLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC PALANIKVDENQIARKRAIVSSMTPAERENPDLLNPSRRRRIAAGSGNSFVDNKFIKDFN CCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCEEECCCCCCHHHHHHHHHHH QAKSMMQGVMSGDMSKMMKDMGINPNNLPKNMPAGMPDMSSLEGMMGQGGMPDLSGLGGD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC MDMSQLFGKGFKGKIGQFAMKQAMKRQANKLKKAKKKRK CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERA CHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGHEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGK HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCCCCHHHHH LANKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQA HHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH RENHNDYVLIDTAGRLQIDEKLMGELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQ HHCCCCEEEEECCCCCEECHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHEECCE LSITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGD EEEEEEEEEEECCCCCCCCEEEEHCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHCCHHH LLTLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC PALANIKVDENQIARKRAIVSSMTPAERENPDLLNPSRRRRIAAGSGNSFVDNKFIKDFN CCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCEEECCCCCCHHHHHHHHHHH QAKSMMQGVMSGDMSKMMKDMGINPNNLPKNMPAGMPDMSSLEGMMGQGGMPDLSGLGGD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC MDMSQLFGKGFKGKIGQFAMKQAMKRQANKLKKAKKKRK CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12397186; 8763945 [H]