Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is pepV [H]
Identifier: 15675062
GI number: 15675062
Start: 879378
End: 880787
Strand: Direct
Name: pepV [H]
Synonym: SPy_1070
Alternate gene names: 15675062
Gene position: 879378-880787 (Clockwise)
Preceding gene: 15675061
Following gene: 15675064
Centisome position: 47.47
GC content: 42.84
Gene sequence:
>1410_bases ATGACAACCATTGATTTTAAAGCAGAAGTTGACAAACGTAAAAAAGCTATGCTAGCAGATTTAGTTGACCTATTACGCAT TAATTCAGAACGCGATGACCAATTAGCTGATGATAAACACCCATTTGGCCCAGGTCCAGTTAAGGCCTTGGAGCATTTCC TCGCAATGGCTGAGCGTGATGGCTACAAAACGCGTAATATTGATAACTATGCAGGTGACTTTGAATTTGGTCAAGGTGAT GAAGTACTAGGAATCTTTGGTCACCTTGATGTTGTGCCAGCTGGTAGCGGTTGGGATACAGACCCTTATGAGCCAGTGAT TAAAGACGATCGCATCTATGCGCGTGGGTCTTCGGATGATAAAGGACCAACCATGGCGTGTTACTACGCTCTGAAAATCA TTAAAGAACTGGGTCTTCCTGTGTCTAAAAAAGTTCGTTTCATTGTTGGTACCGATGAAGAATCTGGCTGGGGGGATATG GATTATTACTTTGCTCATAATGGCTTGAAAAATCCAGATTTTGGTTTCTCACCAGATGCTGAATTTCCAATTATCAATGG TGAGAAAGGAAATATCACTGAATACCTCCATTTCGCTGGTGACAACAAGGGCGCTTTTGTGCTTCATCGCTTCCAAGGTG GGTTGCGTGAAAACATGGTACCAGAATCTGCCACAGCTGTCATTACGGCACCGCATGACCTTGATGTGCTAGAAGCAGCT TTGGAGCAATTTTTATCAGAACATGGTGTTAAAGGTTCTATGAAGGCTACTGATGGTAAAATTGAAGTAACTATTATTGG TAAGTCTGCTCACGGGTCGACTCCAGAAGCGGGTGTTAATGGTGCTACCTTGTTGGCTAAATTCCTGAATCAATTTACCT TTGAAGGGGCTGCTAAGGATTATTTACATGTGGCAGGTGAGGTGCTTCATGAAGACTTTGCGGCAGAAAAACTAGGCCTT GCTTATACTGATGACCGTATGGGAGCCCTGAGCATGAACGCAGGTGTCTTCACCTTTGATAGTCAATCAGCTGACAATAC CATCGCCTTGAATTTCCGCTATCCCAAAGGAACTGATGCGGCAACCTTAAAAGCAGGATTGGAAAAATTACCAGGATTAA CTAAGGTAAGCCTTTCTGAGCATGAACATACACCTCATTATGTGCCAATGGATGATGAATTAGTAGCTACCTTACTTGCT GTTTACGAAAAACAAACAGGTCTTAAAGGCTACGAACAAGTTATCGGCGGAGGAACCTTTGGGCGCTTGCTAGAACGTGG TGTGGCCTTTGGAGCGATGTTCCCAGGTGATGAAAACACTATGCACCAAGCTAATGAGTATATGCCTTTAGAAAATATTT ATCGCTCAGCAGCTATTTATGCTGAAGCAATCTACGAATTAATTAAATAA
Upstream 100 bases:
>100_bases ATGTCCAGATGCGCTACTGAGCGACCACTATTGTTAGACTGATACTATTTTGGCTTATTTTAAGTTAAACATTATCCCTA AAACGAATAAGGAGAGTATA
Downstream 100 bases:
>100_bases GATGCTTATGACAGCAAAAAGAGCTGGAACACTGTTCCAGCTCTTTTGTGATGATTAGAGACTGTTGTTATTTACCAAGA CAGAATTGACTAAAGAGTTG
Product: dipeptidase PepV
Products: succinate; LL-2,6-diaminoheptanedioate
Alternate protein names: Beta-Ala-His dipeptidase; Peptidase V [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTTIDFKAEVDKRKKAMLADLVDLLRINSERDDQLADDKHPFGPGPVKALEHFLAMAERDGYKTRNIDNYAGDFEFGQGD EVLGIFGHLDVVPAGSGWDTDPYEPVIKDDRIYARGSSDDKGPTMACYYALKIIKELGLPVSKKVRFIVGTDEESGWGDM DYYFAHNGLKNPDFGFSPDAEFPIINGEKGNITEYLHFAGDNKGAFVLHRFQGGLRENMVPESATAVITAPHDLDVLEAA LEQFLSEHGVKGSMKATDGKIEVTIIGKSAHGSTPEAGVNGATLLAKFLNQFTFEGAAKDYLHVAGEVLHEDFAAEKLGL AYTDDRMGALSMNAGVFTFDSQSADNTIALNFRYPKGTDAATLKAGLEKLPGLTKVSLSEHEHTPHYVPMDDELVATLLA VYEKQTGLKGYEQVIGGGTFGRLLERGVAFGAMFPGDENTMHQANEYMPLENIYRSAAIYAEAIYELIK
Sequences:
>Translated_469_residues MTTIDFKAEVDKRKKAMLADLVDLLRINSERDDQLADDKHPFGPGPVKALEHFLAMAERDGYKTRNIDNYAGDFEFGQGD EVLGIFGHLDVVPAGSGWDTDPYEPVIKDDRIYARGSSDDKGPTMACYYALKIIKELGLPVSKKVRFIVGTDEESGWGDM DYYFAHNGLKNPDFGFSPDAEFPIINGEKGNITEYLHFAGDNKGAFVLHRFQGGLRENMVPESATAVITAPHDLDVLEAA LEQFLSEHGVKGSMKATDGKIEVTIIGKSAHGSTPEAGVNGATLLAKFLNQFTFEGAAKDYLHVAGEVLHEDFAAEKLGL AYTDDRMGALSMNAGVFTFDSQSADNTIALNFRYPKGTDAATLKAGLEKLPGLTKVSLSEHEHTPHYVPMDDELVATLLA VYEKQTGLKGYEQVIGGGTFGRLLERGVAFGAMFPGDENTMHQANEYMPLENIYRSAAIYAEAIYELIK >Mature_468_residues TTIDFKAEVDKRKKAMLADLVDLLRINSERDDQLADDKHPFGPGPVKALEHFLAMAERDGYKTRNIDNYAGDFEFGQGDE VLGIFGHLDVVPAGSGWDTDPYEPVIKDDRIYARGSSDDKGPTMACYYALKIIKELGLPVSKKVRFIVGTDEESGWGDMD YYFAHNGLKNPDFGFSPDAEFPIINGEKGNITEYLHFAGDNKGAFVLHRFQGGLRENMVPESATAVITAPHDLDVLEAAL EQFLSEHGVKGSMKATDGKIEVTIIGKSAHGSTPEAGVNGATLLAKFLNQFTFEGAAKDYLHVAGEVLHEDFAAEKLGLA YTDDRMGALSMNAGVFTFDSQSADNTIALNFRYPKGTDAATLKAGLEKLPGLTKVSLSEHEHTPHYVPMDDELVATLLAV YEKQTGLKGYEQVIGGGTFGRLLERGVAFGAMFPGDENTMHQANEYMPLENIYRSAAIYAEAIYELIK
Specific function: Is a relatively unspecific dipeptidase cleaving a variety of dipeptides, notably those with an N-terminal beta-Ala or D-Ala residue, e.g. carnosine (beta-Ala-His). To a lesser extent, also shows aminopeptidase activity, since it is able to catalyze the re
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family [H]
Homologues:
Organism=Homo sapiens, GI271398239, Length=78, Percent_Identity=42.3076923076923, Blast_Score=66, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17563146, Length=81, Percent_Identity=40.7407407407407, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193211059, Length=102, Percent_Identity=37.2549019607843, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001261 - InterPro: IPR011291 - InterPro: IPR010964 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF01546 Peptidase_M20 [H]
EC number: 3.5.1.18
Molecular weight: Translated: 51346; Mature: 51215
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00758 ARGE_DAPE_CPG2_1 ; PS00759 ARGE_DAPE_CPG2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIDFKAEVDKRKKAMLADLVDLLRINSERDDQLADDKHPFGPGPVKALEHFLAMAERD CCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC GYKTRNIDNYAGDFEFGQGDEVLGIFGHLDVVPAGSGWDTDPYEPVIKDDRIYARGSSDD CCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCEEEECCCCCC KGPTMACYYALKIIKELGLPVSKKVRFIVGTDEESGWGDMDYYFAHNGLKNPDFGFSPDA CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCC EFPIINGEKGNITEYLHFAGDNKGAFVLHRFQGGLRENMVPESATAVITAPHDLDVLEAA CCCEEECCCCCHHHEEEECCCCCCEEEEEECCCCHHHCCCCCCCEEEEECCCCHHHHHHH LEQFLSEHGVKGSMKATDGKIEVTIIGKSAHGSTPEAGVNGATLLAKFLNQFTFEGAAKD HHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH YLHVAGEVLHEDFAAEKLGLAYTDDRMGALSMNAGVFTFDSQSADNTIALNFRYPKGTDA HHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCEEEECCCCCCCEEEEEEECCCCCCH ATLKAGLEKLPGLTKVSLSEHEHTPHYVPMDDELVATLLAVYEKQTGLKGYEQVIGGGTF HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHH GRLLERGVAFGAMFPGDENTMHQANEYMPLENIYRSAAIYAEAIYELIK HHHHHHHHHEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TTIDFKAEVDKRKKAMLADLVDLLRINSERDDQLADDKHPFGPGPVKALEHFLAMAERD CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC GYKTRNIDNYAGDFEFGQGDEVLGIFGHLDVVPAGSGWDTDPYEPVIKDDRIYARGSSDD CCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCEEEECCCCCC KGPTMACYYALKIIKELGLPVSKKVRFIVGTDEESGWGDMDYYFAHNGLKNPDFGFSPDA CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCC EFPIINGEKGNITEYLHFAGDNKGAFVLHRFQGGLRENMVPESATAVITAPHDLDVLEAA CCCEEECCCCCHHHEEEECCCCCCEEEEEECCCCHHHCCCCCCCEEEEECCCCHHHHHHH LEQFLSEHGVKGSMKATDGKIEVTIIGKSAHGSTPEAGVNGATLLAKFLNQFTFEGAAKD HHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH YLHVAGEVLHEDFAAEKLGLAYTDDRMGALSMNAGVFTFDSQSADNTIALNFRYPKGTDA HHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCEEEECCCCCCCEEEEEEECCCCCCH ATLKAGLEKLPGLTKVSLSEHEHTPHYVPMDDELVATLLAVYEKQTGLKGYEQVIGGGTF HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHH GRLLERGVAFGAMFPGDENTMHQANEYMPLENIYRSAAIYAEAIYELIK HHHHHHHHHEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-succinyl-LL-2,6-diaminoheptanedioate; H2O
Specific reaction: N-succinyl-LL-2,6-diaminoheptanedioate + H2O = succinate + LL-2,6-diaminoheptanedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7528082 [H]