Definition Streptococcus pyogenes M1 GAS chromosome, complete genome.
Accession NC_002737
Length 1,852,441

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The map label for this gene is dnaD [H]

Identifier: 15674969

GI number: 15674969

Start: 786899

End: 787285

Strand: Direct

Name: dnaD [H]

Synonym: SPy_0953

Alternate gene names: 15674969

Gene position: 786899-787285 (Clockwise)

Preceding gene: 15674968

Following gene: 15674970

Centisome position: 42.48

GC content: 36.69

Gene sequence:

>387_bases
ATGGACGAAAAAAAGCTTTTTGAAAATTTCCAATTAACTTTTGGACGGATGATATCGCCATTTGAAATCGAAGATATTCA
AAAGTGGATTCACGAAGATAACATGCCAATTGAAGTTGTCAACCTTGCCTTAAGAGAAGCGGTAGAAAACAACAAAATCA
GTTGGAAGTATATCAATAAAATCTTAGTTGATTGGTATAAATCTGGAGATACGACAGTAGAAAAGGTCAGAGACAGGTTG
CAACGGTTTGACGATAGTAAAAAACAACGAAGTGTAACTACCTCAAACGTCCCAAGCTGGTCGAATCCAGACTACAAAGA
ACCAGATTTAGAAGAATTTGCTCTAGGAAGCATGGACGGTATAGAAGATGGATCAGGAGATTTTTAA

Upstream 100 bases:

>100_bases
TGTAAAACGTAACACTAATAATTACTAACTTATAAATAAATACTAAATAACAATAAATACTAACAGATAATAAGCATCAT
CATCAACATCAGGAGGAGCT

Downstream 100 bases:

>100_bases
TTTTTTTAACAAACAAATCAAAAAAGATTTTGGTAAAACGGCGAGTAAAGAGACTTTTGCTAAGTTTGCTAGTTACTGCG
CCGAAGGAATCGAAAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MDEKKLFENFQLTFGRMISPFEIEDIQKWIHEDNMPIEVVNLALREAVENNKISWKYINKILVDWYKSGDTTVEKVRDRL
QRFDDSKKQRSVTTSNVPSWSNPDYKEPDLEEFALGSMDGIEDGSGDF

Sequences:

>Translated_128_residues
MDEKKLFENFQLTFGRMISPFEIEDIQKWIHEDNMPIEVVNLALREAVENNKISWKYINKILVDWYKSGDTTVEKVRDRL
QRFDDSKKQRSVTTSNVPSWSNPDYKEPDLEEFALGSMDGIEDGSGDF
>Mature_128_residues
MDEKKLFENFQLTFGRMISPFEIEDIQKWIHEDNMPIEVVNLALREAVENNKISWKYINKILVDWYKSGDTTVEKVRDRL
QRFDDSKKQRSVTTSNVPSWSNPDYKEPDLEEFALGSMDGIEDGSGDF

Specific function: Probable component of primosome involved in the initiation of DNA replication [H]

COG id: COG3935

COG function: function code L; Putative primosome component and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006343 [H]

Pfam domain/function: PF07261 DnaB_2 [H]

EC number: NA

Molecular weight: Translated: 15026; Mature: 15026

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKKLFENFQLTFGRMISPFEIEDIQKWIHEDNMPIEVVNLALREAVENNKISWKYINK
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
ILVDWYKSGDTTVEKVRDRLQRFDDSKKQRSVTTSNVPSWSNPDYKEPDLEEFALGSMDG
HHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
IEDGSGDF
CCCCCCCC
>Mature Secondary Structure
MDEKKLFENFQLTFGRMISPFEIEDIQKWIHEDNMPIEVVNLALREAVENNKISWKYINK
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
ILVDWYKSGDTTVEKVRDRLQRFDDSKKQRSVTTSNVPSWSNPDYKEPDLEEFALGSMDG
HHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
IEDGSGDF
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704260; 8760912; 9384377 [H]