Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ybgI [C]
Identifier: 15674951
GI number: 15674951
Start: 773810
End: 774598
Strand: Direct
Name: ybgI [C]
Synonym: SPy_0931
Alternate gene names: 15674951
Gene position: 773810-774598 (Clockwise)
Preceding gene: 15674950
Following gene: 15674952
Centisome position: 41.77
GC content: 40.56
Gene sequence:
>789_bases ATGAAAGCTAAAACCCTAATTGATGCCTATGAAGCCTTTTGCCCACTTGATTTATCTATGGAAGGAGACGTTAAAGGTCT TCAAATGGGTTCATTGGATAAAGACATTCGTAAGGTTATGATTACTTTAGATATCCGAGAGTCAACAGTAGCAGAAGCCA TCAAAAATGAAGTTGATCTCATTATAACTAAGCATGCTCCCATCTTTAAACCGCTTAAAGATCTGGTTTCATCCCCTCAG CGTGATATCCTTCTAGATTTGGTCAAGCATGACATTTCTGTCTATGTGAGCCATACCAATATTGACATTGTACCAGGTGG GCTAAATGATTGGTTTTGTGACCTGCTAGAAATCAAGGAAGCAACTTACTTGTCTGAAACCAAAGAAGGCTTTGGCATTG GTCGTATTGGAACAGTTAAAGAACAAGCGTTAGAAGAGTTAGCAAGTAAGGTCAAAAGGGTGTTTGATTTAGATACCGTG CGACTTATCCGTTACGATAAGGAAAACCCTTTGATTTCAAAGATTGCTATCTGTGGCGGAAGTGGTGGTGAATTTTATCA GGATGCTGTGCAAAAAGGCGCAGACGTTTATATTACAGGGGATATCTATTACCATACAGCACAGGAGATGCTGACAGAAG GACTATTTGCGGTTGACCCGGGGCATCATATTGAGGTGCTTTTTACGGAGAAATTAAAGGAGAAACTCCAAGGGTGGAAA GAAGAGAACGGTTGGGATGTCAGCATTATTTCAAGCAAAGCCTCGACCAATCCATTTAGCCATTTATAG
Upstream 100 bases:
>100_bases GATAAGTTAGCTTATGCCTTGTCCTGCATCCCAGAAGAAAAAACTCAAGAGCGTCAGCTTCTCTTGACAAAAATACAACA AATAAAAGAGGTGATTGTTC
Downstream 100 bases:
>100_bases GCTGTTAAGGTCTTAAAATAAGATAAAAGGATACCAGGAATGAAAATAGCCATTATTGGGGCGGGGATTGTAGGATCAAC CGCCGCTTATTATTTACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKAKTLIDAYEAFCPLDLSMEGDVKGLQMGSLDKDIRKVMITLDIRESTVAEAIKNEVDLIITKHAPIFKPLKDLVSSPQ RDILLDLVKHDISVYVSHTNIDIVPGGLNDWFCDLLEIKEATYLSETKEGFGIGRIGTVKEQALEELASKVKRVFDLDTV RLIRYDKENPLISKIAICGGSGGEFYQDAVQKGADVYITGDIYYHTAQEMLTEGLFAVDPGHHIEVLFTEKLKEKLQGWK EENGWDVSIISSKASTNPFSHL
Sequences:
>Translated_262_residues MKAKTLIDAYEAFCPLDLSMEGDVKGLQMGSLDKDIRKVMITLDIRESTVAEAIKNEVDLIITKHAPIFKPLKDLVSSPQ RDILLDLVKHDISVYVSHTNIDIVPGGLNDWFCDLLEIKEATYLSETKEGFGIGRIGTVKEQALEELASKVKRVFDLDTV RLIRYDKENPLISKIAICGGSGGEFYQDAVQKGADVYITGDIYYHTAQEMLTEGLFAVDPGHHIEVLFTEKLKEKLQGWK EENGWDVSIISSKASTNPFSHL >Mature_262_residues MKAKTLIDAYEAFCPLDLSMEGDVKGLQMGSLDKDIRKVMITLDIRESTVAEAIKNEVDLIITKHAPIFKPLKDLVSSPQ RDILLDLVKHDISVYVSHTNIDIVPGGLNDWFCDLLEIKEATYLSETKEGFGIGRIGTVKEQALEELASKVKRVFDLDTV RLIRYDKENPLISKIAICGGSGGEFYQDAVQKGADVYITGDIYYHTAQEMLTEGLFAVDPGHHIEVLFTEKLKEKLQGWK EENGWDVSIISSKASTNPFSHL
Specific function: Unknown
COG id: COG0327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0135 (NIF3) family
Homologues:
Organism=Saccharomyces cerevisiae, GI6321217, Length=256, Percent_Identity=28.515625, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI19921430, Length=214, Percent_Identity=30.8411214953271, Blast_Score=94, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y644_STRP3 (P67275)
Other databases:
- EMBL: AE014074 - EMBL: BA000034 - RefSeq: NP_664448.1 - RefSeq: NP_802470.1 - ProteinModelPortal: P67275 - SMR: P67275 - EnsemblBacteria: EBSTRT00000034052 - EnsemblBacteria: EBSTRT00000036497 - GeneID: 1008958 - GeneID: 1065348 - GenomeReviews: AE014074_GR - GenomeReviews: BA000034_GR - KEGG: spg:SpyM3_0644 - KEGG: sps:SPs1208 - GeneTree: EBGT00050000028053 - HOGENOM: HBG554751 - OMA: LAVEELW - ProtClustDB: CLSK877132 - BioCyc: SPYO193567:SPS1208-MONOMER - BioCyc: SPYO198466:SPYM3_0644-MONOMER - InterPro: IPR002678 - PANTHER: PTHR13799 - TIGRFAMs: TIGR00486
Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3
EC number: NA
Molecular weight: Translated: 29290; Mature: 29290
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKTLIDAYEAFCPLDLSMEGDVKGLQMGSLDKDIRKVMITLDIRESTVAEAIKNEVDL CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEECCHHHHHHHHHCCEEE IITKHAPIFKPLKDLVSSPQRDILLDLVKHDISVYVSHTNIDIVPGGLNDWFCDLLEIKE EEECCCCHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEECCEEEEECCCCHHHHHHHHHHH ATYLSETKEGFGIGRIGTVKEQALEELASKVKRVFDLDTVRLIRYDKENPLISKIAICGG HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECC SGGEFYQDAVQKGADVYITGDIYYHTAQEMLTEGLFAVDPGHHIEVLFTEKLKEKLQGWK CCCHHHHHHHHCCCCEEEECCEEEHHHHHHHHCCCEEECCCCEEEEEEHHHHHHHHCCCC EENGWDVSIISSKASTNPFSHL CCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MKAKTLIDAYEAFCPLDLSMEGDVKGLQMGSLDKDIRKVMITLDIRESTVAEAIKNEVDL CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEECCHHHHHHHHHCCEEE IITKHAPIFKPLKDLVSSPQRDILLDLVKHDISVYVSHTNIDIVPGGLNDWFCDLLEIKE EEECCCCHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEECCEEEEECCCCHHHHHHHHHHH ATYLSETKEGFGIGRIGTVKEQALEELASKVKRVFDLDTVRLIRYDKENPLISKIAICGG HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECC SGGEFYQDAVQKGADVYITGDIYYHTAQEMLTEGLFAVDPGHHIEVLFTEKLKEKLQGWK CCCHHHHHHHHCCCCEEEECCEEEHHHHHHHHCCCEEECCCCEEEEEEHHHHHHHHCCCC EENGWDVSIISSKASTNPFSHL CCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12122206; 12799345