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The map label for this gene is ybfF [C]

Identifier: 15674837

GI number: 15674837

Start: 654334

End: 655029

Strand: Direct

Name: ybfF [C]

Synonym: SPy_0794

Alternate gene names: 15674837

Gene position: 654334-655029 (Clockwise)

Preceding gene: 15674836

Following gene: 15674838

Centisome position: 35.32

GC content: 35.92

Gene sequence:

>696_bases
GTGAAAAAGTTAATCATTATTCCTGCTTACAATGAAAGCAGTAATATTGTCAATACTATACGTACTATTGAATCAGATGC
CCCGGATTTTGACTATATCATTATTGATGATTGCTCAACGGATAATACGTTAGCAATATGTCAAAAACAGGGGTTCAATG
TTATTTCTTTGCCCATTAACCTGGGAATTGGCGGTGCGGTGCAAACTGGCTATCGTTATGCACAAAGATGTGGATATGAC
GTTGCAGTTCAAGTAGATGGAGATGGTCAGCACAATCCATGCTATTTGGAAAAAATGGTTGAGGTATTAGTTCAATCTTC
AGTAAATATGGTAATTGGATCACGATTTATCACAAAAGAAGGGTTTCAGTCATCATTTGCTCGACGTATCGGCATAAAGT
ATTTTACTTGGCTTATTGCGCTACTAACAGGAAAAAAAATAACAGATGCAACGTCAGGTCTAAGGTTAATTGACCGTTCA
TTGATTGAACGTTTTGCTAATCATTATCCAGATGATTATCCTGAACCTGAAACAGTTGTTGATGTATTGGTTAGTCATTT
TAAAGTGAAAGAAATTCCTGTTGTAATGAATGAGCGACAAGGCGGTGTGTCATCTATCTCGTTGACGAAATCGGTCTATT
ATATGATTAAAGTGACTTTAGCTATTTTAGTTGTTAGATTGAAAGGAAATCGTTAA

Upstream 100 bases:

>100_bases
AGGACCAGGTTTAAAAGATTATAATTCTTAAGGTCTTATTCGTTTATAAAAAATGAATACTCTTTTAAAATCTTAATTGA
AATGAATAGGAGAAGTTTTC

Downstream 100 bases:

>100_bases
AATGACGGTAACAGCCAGTTTATTTATAAGTTTTATTGTATTAACCTTTGTTTTCTTTTTGATTAACTTAATCAAAAAAG
ATAAACTAGCGATTAAGTAC

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKKLIIIPAYNESSNIVNTIRTIESDAPDFDYIIIDDCSTDNTLAICQKQGFNVISLPINLGIGGAVQTGYRYAQRCGYD
VAVQVDGDGQHNPCYLEKMVEVLVQSSVNMVIGSRFITKEGFQSSFARRIGIKYFTWLIALLTGKKITDATSGLRLIDRS
LIERFANHYPDDYPEPETVVDVLVSHFKVKEIPVVMNERQGGVSSISLTKSVYYMIKVTLAILVVRLKGNR

Sequences:

>Translated_231_residues
MKKLIIIPAYNESSNIVNTIRTIESDAPDFDYIIIDDCSTDNTLAICQKQGFNVISLPINLGIGGAVQTGYRYAQRCGYD
VAVQVDGDGQHNPCYLEKMVEVLVQSSVNMVIGSRFITKEGFQSSFARRIGIKYFTWLIALLTGKKITDATSGLRLIDRS
LIERFANHYPDDYPEPETVVDVLVSHFKVKEIPVVMNERQGGVSSISLTKSVYYMIKVTLAILVVRLKGNR
>Mature_231_residues
MKKLIIIPAYNESSNIVNTIRTIESDAPDFDYIIIDDCSTDNTLAICQKQGFNVISLPINLGIGGAVQTGYRYAQRCGYD
VAVQVDGDGQHNPCYLEKMVEVLVQSSVNMVIGSRFITKEGFQSSFARRIGIKYFTWLIALLTGKKITDATSGLRLIDRS
LIERFANHYPDDYPEPETVVDVLVSHFKVKEIPVVMNERQGGVSSISLTKSVYYMIKVTLAILVVRLKGNR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788588, Length=237, Percent_Identity=24.0506329113924, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 25807; Mature: 25807

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIIIPAYNESSNIVNTIRTIESDAPDFDYIIIDDCSTDNTLAICQKQGFNVISLPIN
CCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEEE
LGIGGAVQTGYRYAQRCGYDVAVQVDGDGQHNPCYLEKMVEVLVQSSVNMVIGSRFITKE
CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
GFQSSFARRIGIKYFTWLIALLTGKKITDATSGLRLIDRSLIERFANHYPDDYPEPETVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
DVLVSHFKVKEIPVVMNERQGGVSSISLTKSVYYMIKVTLAILVVRLKGNR
HHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure
MKKLIIIPAYNESSNIVNTIRTIESDAPDFDYIIIDDCSTDNTLAICQKQGFNVISLPIN
CCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEEE
LGIGGAVQTGYRYAQRCGYDVAVQVDGDGQHNPCYLEKMVEVLVQSSVNMVIGSRFITKE
CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
GFQSSFARRIGIKYFTWLIALLTGKKITDATSGLRLIDRSLIERFANHYPDDYPEPETVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
DVLVSHFKVKEIPVVMNERQGGVSSISLTKSVYYMIKVTLAILVVRLKGNR
HHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]