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The map label for this gene is rgpCc [H]

Identifier: 15674832

GI number: 15674832

Start: 646944

End: 647705

Strand: Direct

Name: rgpCc [H]

Synonym: SPy_0789

Alternate gene names: 15674832

Gene position: 646944-647705 (Clockwise)

Preceding gene: 15674831

Following gene: 15674833

Centisome position: 34.92

GC content: 34.51

Gene sequence:

>762_bases
ATGGTAAAAACGGATTTTAAATTACGCTATCAAGGGAGCGCAATTGGCTATCTATGGTCTATCTTAAAACCGCTTATGAT
GTTTACGATTATGTACTTGGTATTTATTCGTTTTCTTCGCCTGGGTGGAAATGTACCTCATTTTCCAGTAGCGCTTTTAT
TGGCAAATGTCATCTGGTCTTTTTTTTCAGAAGCAACTAGCATGGGAATGGTATCTATTGTATCTCGGGGAGACTTGTTG
CGAAAATTGAACTTTTCTAAGCACATCATTGTTTTTTCGGCAGTGTTAGGAGCTTTAATTAATTTTCTTATTAATTTGGT
TGTTGTTTTAATTTTTGCGTTGATAAATGGTGTGACTATATCAGGGTATGCTTATCTCTCTCTTTTTCTTTTTATAGAAT
TAGTTGTTTTAGTGCTTGGAATTGCATTGTTATTGTCGAATGTCTTTGTTTATTATCGTGACTTAGCTCAAGTCTGGGAA
GTACTATTACAAGCAGGTATGTATGCCACTCCAATCATTTATCCGATCACTTTTGTTTTAGATAGCCACCCTTTGGCGGC
AAAGTTGTTGATGCTAAATCCAGTAGCACAAATGATTCAAGATTTTCGTTATTTATTGATTGACAGGGCCAACGTAACGA
TTTGGCAGATGTCAACCAATTGGTTTTACATTGTTATTCCATATTTAGTACCATTTGTTATATTATTTATTGGCATCTTT
GTCTTTAAGAAAAATGCCGATAGATTTGCGGAGATTATTTAA

Upstream 100 bases:

>100_bases
ACACCTTTATTTTTCGTAGTTTAGTTGTTACCTTATTTGGTTACAGGAGAAAGTAAGAATGAATTTTTTAACAAAGAAAA
ACCGTATTTTACTGAGAGAA

Downstream 100 bases:

>100_bases
TGATTAATAGAGAAATTGCAGTAAAAGTACAGCATGTTAGTAAAACGTTTAAACTGCCTACAGAAGCAACTAAAAGTTTT
CGCACGACTCTGGTTAATCG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MVKTDFKLRYQGSAIGYLWSILKPLMMFTIMYLVFIRFLRLGGNVPHFPVALLLANVIWSFFSEATSMGMVSIVSRGDLL
RKLNFSKHIIVFSAVLGALINFLINLVVVLIFALINGVTISGYAYLSLFLFIELVVLVLGIALLLSNVFVYYRDLAQVWE
VLLQAGMYATPIIYPITFVLDSHPLAAKLLMLNPVAQMIQDFRYLLIDRANVTIWQMSTNWFYIVIPYLVPFVILFIGIF
VFKKNADRFAEII

Sequences:

>Translated_253_residues
MVKTDFKLRYQGSAIGYLWSILKPLMMFTIMYLVFIRFLRLGGNVPHFPVALLLANVIWSFFSEATSMGMVSIVSRGDLL
RKLNFSKHIIVFSAVLGALINFLINLVVVLIFALINGVTISGYAYLSLFLFIELVVLVLGIALLLSNVFVYYRDLAQVWE
VLLQAGMYATPIIYPITFVLDSHPLAAKLLMLNPVAQMIQDFRYLLIDRANVTIWQMSTNWFYIVIPYLVPFVILFIGIF
VFKKNADRFAEII
>Mature_253_residues
MVKTDFKLRYQGSAIGYLWSILKPLMMFTIMYLVFIRFLRLGGNVPHFPVALLLANVIWSFFSEATSMGMVSIVSRGDLL
RKLNFSKHIIVFSAVLGALINFLINLVVVLIFALINGVTISGYAYLSLFLFIELVVLVLGIALLLSNVFVYYRDLAQVWE
VLLQAGMYATPIIYPITFVLDSHPLAAKLLMLNPVAQMIQDFRYLLIDRANVTIWQMSTNWFYIVIPYLVPFVILFIGIF
VFKKNADRFAEII

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28883; Mature: 28883

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTDFKLRYQGSAIGYLWSILKPLMMFTIMYLVFIRFLRLGGNVPHFPVALLLANVIWS
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FFSEATSMGMVSIVSRGDLLRKLNFSKHIIVFSAVLGALINFLINLVVVLIFALINGVTI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
SGYAYLSLFLFIELVVLVLGIALLLSNVFVYYRDLAQVWEVLLQAGMYATPIIYPITFVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DSHPLAAKLLMLNPVAQMIQDFRYLLIDRANVTIWQMSTNWFYIVIPYLVPFVILFIGIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHH
VFKKNADRFAEII
HHHCCHHHHHHCC
>Mature Secondary Structure
MVKTDFKLRYQGSAIGYLWSILKPLMMFTIMYLVFIRFLRLGGNVPHFPVALLLANVIWS
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FFSEATSMGMVSIVSRGDLLRKLNFSKHIIVFSAVLGALINFLINLVVVLIFALINGVTI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
SGYAYLSLFLFIELVVLVLGIALLLSNVFVYYRDLAQVWEVLLQAGMYATPIIYPITFVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DSHPLAAKLLMLNPVAQMIQDFRYLLIDRANVTIWQMSTNWFYIVIPYLVPFVILFIGIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHH
VFKKNADRFAEII
HHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7533882 [H]