Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ypfJ [H]
Identifier: 15674820
GI number: 15674820
Start: 630404
End: 631321
Strand: Reverse
Name: ypfJ [H]
Synonym: SPy_0775
Alternate gene names: 15674820
Gene position: 631321-630404 (Counterclockwise)
Preceding gene: 15674825
Following gene: 15674787
Centisome position: 34.08
GC content: 44.23
Gene sequence:
>918_bases ATGAAAACGGATGATTTGAGAGAAAGTCAACAGGTTGAAGATAGACGTGGTCAATCGTCTGGTTCTTTTGGGGGCGGCGG CCTAGGGGGCGGTCTCCTGCTTCAATTACTCTTTTCACGAGGAGGTTGGAAAACCAAGCTGGTTATTCTTCTCCTTCTCC TAGTTATGGGAGGTGGTGGCCTATCTGGTGTTTTAGGAGGCAAGCCTTCTTCTACCAACAACAATGCCTATCAATCAAGC CAAGTAACGCGTACAAATGGTGACAAGGCTAGTCAAGAACAGGTTTCTTTTGTCAGTAAGGTCTTCGCCTCTACCGAGGA CTATTGGACTAAGACATTTCGTGAGAAAGGGTTAACTTATCATAAACCAACATTAGTTCTATATACTGGAGCAACTCAAA CCGCTTGTGGCAGGGGGCAAGCCTCTTCTGGTCCTTTTTATTGCCCAGGCGATCAAAAAGTGTATTTAGATATTTCTTTT TATAATGAACTATCAACCAAGTACGGCGCAAAAGGTGATTTTGCTATGGCCTATGTGATTGCTCATGAAGTTGGCCACCA CATCCAAAATGAATTGGGAATTATGGATAATTACGCTAGCGCTAGACAAGGAAAATCAAAGGCTAAAGCCAATCAGCTCA ACGTCAAGTTGGAATTACAAGCTGATTACTATGCTGGTGCCTGGGCTAATTATGTTCAAGGGCAAGGCCTTTTGGAAAAA GGAGATATTGAGGAAGCAATGGCAGCAGCTCACGCAGTTGGGGATGATACTCTGCAAGAAGAAACCTATGGCAGAACCGT TCCTGATAGTTTTACACATGGCACTTCTAAGCAACGCCAACGTTGGTTTGACCGAGGTTACCAATATGGCGACTTTGAGC ATGGTGATACCTTTAGCATCCCGTATAGTAAGCTTTAG
Upstream 100 bases:
>100_bases CCTATTGCTTTTCCTATTTTTAGTTATAATCTCATCATAAAAATAGCAATTCTAATAGAATTATTTTATAATAAAATCAA GAAATAGATGGGAGAAACTT
Downstream 100 bases:
>100_bases GGAAATGGTGACGTATTGATAATAGTCACACTTAGAAAAAAACCAAACAAGTGCTGTGCTTGTTTGGTTTTTTTCTAATA TCATAAACTCTTACCAGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKTDDLRESQQVEDRRGQSSGSFGGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGLSGVLGGKPSSTNNNAYQSS QVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYHKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISF YNELSTKYGAKGDFAMAYVIAHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQADYYAGAWANYVQGQGLLEK GDIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIPYSKL
Sequences:
>Translated_305_residues MKTDDLRESQQVEDRRGQSSGSFGGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGLSGVLGGKPSSTNNNAYQSS QVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYHKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISF YNELSTKYGAKGDFAMAYVIAHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQADYYAGAWANYVQGQGLLEK GDIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIPYSKL >Mature_305_residues MKTDDLRESQQVEDRRGQSSGSFGGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGLSGVLGGKPSSTNNNAYQSS QVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYHKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISF YNELSTKYGAKGDFAMAYVIAHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQADYYAGAWANYVQGQGLLEK GDIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIPYSKL
Specific function: Unknown
COG id: COG2321
COG function: function code R; Predicted metalloprotease
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788819, Length=300, Percent_Identity=47, Blast_Score=263, Evalue=1e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007343 [H]
Pfam domain/function: PF04228 Zn_peptidase [H]
EC number: NA
Molecular weight: Translated: 33318; Mature: 33318
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDDLRESQQVEDRRGQSSGSFGGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGG CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC LSGVLGGKPSSTNNNAYQSSQVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTY CCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEE HKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISFYNELSTKYGAKGDFAMAYVI ECCEEEEEECCCHHHCCCCCCCCCCEECCCCCEEEEEEEEHHHHHHHCCCCCCHHHHHHH AHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQADYYAGAWANYVQGQGLLEK HHHHHHHHHHHHCCHHCHHHHHCCHHHHHHHHEEEEEEEECCCCCCHHHHHHCCCCCCCC GDIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSI CCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECC PYSKL CHHCC >Mature Secondary Structure MKTDDLRESQQVEDRRGQSSGSFGGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGG CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC LSGVLGGKPSSTNNNAYQSSQVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTY CCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEE HKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISFYNELSTKYGAKGDFAMAYVI ECCEEEEEECCCHHHCCCCCCCCCCEECCCCCEEEEEEEEHHHHHHHCCCCCCHHHHHHH AHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQADYYAGAWANYVQGQGLLEK HHHHHHHHHHHHCCHHCHHHHHCCHHHHHHHHEEEEEEEECCCCCCHHHHHHCCCCCCCC GDIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSI CCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECC PYSKL CHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]