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The map label for this gene is ybaK [C]

Identifier: 15674682

GI number: 15674682

Start: 481682

End: 482161

Strand: Reverse

Name: ybaK [C]

Synonym: SPy_0599

Alternate gene names: 15674682

Gene position: 482161-481682 (Counterclockwise)

Preceding gene: 15674683

Following gene: 15674681

Centisome position: 26.03

GC content: 37.29

Gene sequence:

>480_bases
ATGGCTAAAAAAACAAAACTCAAAAAAACCTTAGTAGAACAAATCCTCGATAAGGCTAATATTGCTCATCAAGGACTCAA
GCTTAATGCTTTAGAAGGCGACTTTCCAGATGATCTTCAACCATCAGATATTTACAAGACACTTGCTCTGACTGGTGATC
AAACAGGTCCTCTAATTGGCATTATTCCATTAACAGAACACTTATCAGAAAAACAATTGGCAAAAGTATCAGGTAACAAA
AAAGTGTCCATGGTTCCTCAAAAAGACTTGCAAAAGACAACAGGCTATATTCACGGTGCCAATAATCCTGTTGGGATTCG
TCAAAAACATTCATATCCTATTTTTATTGACCAAACTGCACTGGAAAAAGGTCAAATAATCGTTTCAGCTGGTGAAGTTG
GGCGTTCTATAAAGATTTCTAGCCAGGCTCTAGCTGATTTCGTTGGCGCAAGCTTTGCTGATTTAAAGAAGAGAAAATGA

Upstream 100 bases:

>100_bases
CAAAGACTAATTTTTAGTCATTTGAATCTTACATTAAAAAAATGGTATAATAATGTTGTTATACCATTTTTTTATGTTTA
GATAAAGGTAAGGACTTGAT

Downstream 100 bases:

>100_bases
ACACTACTGCCAACTTTATCTGGTTTCTTTTTTAAGTTTTTCGCCTTGATTAAGCTAGTCTTTGTTTAGTATTATTTTGA
TCTCAACTGCTTTAACATTG

Product: putative transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAKKTKLKKTLVEQILDKANIAHQGLKLNALEGDFPDDLQPSDIYKTLALTGDQTGPLIGIIPLTEHLSEKQLAKVSGNK
KVSMVPQKDLQKTTGYIHGANNPVGIRQKHSYPIFIDQTALEKGQIIVSAGEVGRSIKISSQALADFVGASFADLKKRK

Sequences:

>Translated_159_residues
MAKKTKLKKTLVEQILDKANIAHQGLKLNALEGDFPDDLQPSDIYKTLALTGDQTGPLIGIIPLTEHLSEKQLAKVSGNK
KVSMVPQKDLQKTTGYIHGANNPVGIRQKHSYPIFIDQTALEKGQIIVSAGEVGRSIKISSQALADFVGASFADLKKRK
>Mature_158_residues
AKKTKLKKTLVEQILDKANIAHQGLKLNALEGDFPDDLQPSDIYKTLALTGDQTGPLIGIIPLTEHLSEKQLAKVSGNKK
VSMVPQKDLQKTTGYIHGANNPVGIRQKHSYPIFIDQTALEKGQIIVSAGEVGRSIKISSQALADFVGASFADLKKRK

Specific function: Affects the expression of the receptor, named binding substance, that mediates mating aggregate formation. Could be a regulatory protein that suppresses the function or expression of ebsA and/or ebsMB [H]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prolyl-tRNA editing family. ProX subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786688, Length=122, Percent_Identity=37.7049180327869, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 17272; Mature: 17141

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKTKLKKTLVEQILDKANIAHQGLKLNALEGDFPDDLQPSDIYKTLALTGDQTGPLIG
CCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEE
IIPLTEHLSEKQLAKVSGNKKVSMVPQKDLQKTTGYIHGANNPVGIRQKHSYPIFIDQTA
EECCHHHHCHHHHHHHCCCCEEEECCHHHHHHHCCEEECCCCCCCCCCCCCCCEEEECCC
LEKGQIIVSAGEVGRSIKISSQALADFVGASFADLKKRK
CCCCCEEEECCCCCCEEEEHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
AKKTKLKKTLVEQILDKANIAHQGLKLNALEGDFPDDLQPSDIYKTLALTGDQTGPLIG
CCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEE
IIPLTEHLSEKQLAKVSGNKKVSMVPQKDLQKTTGYIHGANNPVGIRQKHSYPIFIDQTA
EECCHHHHCHHHHHHHCCCCEEEECCHHHHHHHCCEEECCCCCCCCCCCCCCCEEEECCC
LEKGQIIVSAGEVGRSIKISSQALADFVGASFADLKKRK
CCCCCEEEECCCCCCEEEEHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226689; 12663927 [H]