Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ppiB [C]
Identifier: 15674576
GI number: 15674576
Start: 374201
End: 375007
Strand: Reverse
Name: ppiB [C]
Synonym: SPy_0457
Alternate gene names: 15674576
Gene position: 375007-374201 (Counterclockwise)
Preceding gene: 15674578
Following gene: 15674572
Centisome position: 20.24
GC content: 38.91
Gene sequence:
>807_bases ATGAAAAAATTATTATCTCTCAGTTTAGTAGCCATTAGTTTACTTAATTTGAGTGCTTGTGAATCTGTTGACCGCGCTAT AAAAGGCGATAAATACATTGATGAAAAAACTGCCAAAGAAGAAAGCGAAGCAGCTTCTAAAGCCTATGAAGAAAGCATTC AAAAAGCTCTCAAAGCTGATGCTAGCCAATTTCCACAACTAACCAAAGAAGTCGGCAAAGAAGAAGCTAAGGTCGTAATG AGGACAAGTCAAGGGGACATTACCCTTAAGTTATTCCCAAAATATGCTCCCTTAGCTGTTGAGAACTTCCTCACCCATGC TAAAAAAGGCTACTATGATAACCTTACCTTCCATCGTGTGATCAACGACTTTATGATTCAATCAGGTGACCCCAAAGGAG ATGGCACAGGTGGTGAATCGATTTGGAAAGGCAAGGATCCTAAAAAAGATGCTGGCAATGGCTTTGTCAACGAAATCTCT CCATTTTTATATCATATTCGCGGTGCTCTTGCCATGGCAAATGCTGGTGCTAATACTAACGGTAGCCAATTTTATATCAA CCAAAACAAGAAAAATCAAAGCAAGGGATTATCAAGTACCAACTACCCAAAACCTATCATCTCTGCCTATGAGCATGGCG GCAATCCAAGCTTAGATGGCGGTTATACTGTATTTGGTCAAGTCATTGATGGTATGGATGTTGTCGATAAAATTGCCGCT ACTTCTATCAACCAAAATGATAAACCAGAACAAGACATTACGATTACCTCAATTGACATTGTCAAAGATTATCGCTTTAA AAACTAA
Upstream 100 bases:
>100_bases GTTAGATCATAAAACACAAAAATAGGCGTTTTTAACTCTTTACTACTATTTTCTGTTGCATTTTATGATAAAATAAAGAA AATCATTCTTAGGAGTAGAC
Downstream 100 bases:
>100_bases ATCATGCTTAAAAAAACCTTATCAGATAATAGGCTAAATACCTTGGTTTGATAAGGTTTTTTATGGTCTTTTGATGACAT ATAAAAAACACCCTTTGATG
Product: putative cyclophilin-type protein
Products: NA
Alternate protein names: PPIase; Rotamase [H]
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKKLLSLSLVAISLLNLSACESVDRAIKGDKYIDEKTAKEESEAASKAYEESIQKALKADASQFPQLTKEVGKEEAKVVM RTSQGDITLKLFPKYAPLAVENFLTHAKKGYYDNLTFHRVINDFMIQSGDPKGDGTGGESIWKGKDPKKDAGNGFVNEIS PFLYHIRGALAMANAGANTNGSQFYINQNKKNQSKGLSSTNYPKPIISAYEHGGNPSLDGGYTVFGQVIDGMDVVDKIAA TSINQNDKPEQDITITSIDIVKDYRFKN
Sequences:
>Translated_268_residues MKKLLSLSLVAISLLNLSACESVDRAIKGDKYIDEKTAKEESEAASKAYEESIQKALKADASQFPQLTKEVGKEEAKVVM RTSQGDITLKLFPKYAPLAVENFLTHAKKGYYDNLTFHRVINDFMIQSGDPKGDGTGGESIWKGKDPKKDAGNGFVNEIS PFLYHIRGALAMANAGANTNGSQFYINQNKKNQSKGLSSTNYPKPIISAYEHGGNPSLDGGYTVFGQVIDGMDVVDKIAA TSINQNDKPEQDITITSIDIVKDYRFKN >Mature_268_residues MKKLLSLSLVAISLLNLSACESVDRAIKGDKYIDEKTAKEESEAASKAYEESIQKALKADASQFPQLTKEVGKEEAKVVM RTSQGDITLKLFPKYAPLAVENFLTHAKKGYYDNLTFHRVINDFMIQSGDPKGDGTGGESIWKGKDPKKDAGNGFVNEIS PFLYHIRGALAMANAGANTNGSQFYINQNKKNQSKGLSSTNYPKPIISAYEHGGNPSLDGGYTVFGQVIDGMDVVDKIAA TSINQNDKPEQDITITSIDIVKDYRFKN
Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides [H]
COG id: COG0652
COG function: function code O; Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase cyclophilin-type domain [H]
Homologues:
Organism=Homo sapiens, GI24308049, Length=184, Percent_Identity=43.4782608695652, Blast_Score=144, Evalue=7e-35, Organism=Homo sapiens, GI19557636, Length=185, Percent_Identity=37.8378378378378, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI7706339, Length=183, Percent_Identity=37.7049180327869, Blast_Score=121, Evalue=8e-28, Organism=Homo sapiens, GI4758950, Length=175, Percent_Identity=39.4285714285714, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI64276486, Length=187, Percent_Identity=32.0855614973262, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI20911035, Length=179, Percent_Identity=35.7541899441341, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI4505991, Length=175, Percent_Identity=39.4285714285714, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI22547215, Length=199, Percent_Identity=35.678391959799, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI22547212, Length=199, Percent_Identity=35.678391959799, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI7657473, Length=199, Percent_Identity=35.678391959799, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI42560244, Length=186, Percent_Identity=33.8709677419355, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI150418007, Length=210, Percent_Identity=36.1904761904762, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI6631100, Length=196, Percent_Identity=32.1428571428571, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI5454154, Length=181, Percent_Identity=33.1491712707182, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI5031987, Length=176, Percent_Identity=36.3636363636364, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI4826932, Length=191, Percent_Identity=34.0314136125654, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI5174637, Length=175, Percent_Identity=34.8571428571429, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI10863927, Length=175, Percent_Identity=34.2857142857143, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI45439316, Length=158, Percent_Identity=35.4430379746835, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI303305009, Length=158, Percent_Identity=35.4430379746835, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI14277126, Length=190, Percent_Identity=30.5263157894737, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI310127646, Length=175, Percent_Identity=32.5714285714286, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI310114371, Length=175, Percent_Identity=32.5714285714286, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI310119221, Length=175, Percent_Identity=32.5714285714286, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI256017253, Length=175, Percent_Identity=33.1428571428571, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI221139811, Length=175, Percent_Identity=33.1428571428571, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI256017251, Length=175, Percent_Identity=33.1428571428571, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1786736, Length=192, Percent_Identity=35.9375, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1789763, Length=171, Percent_Identity=36.2573099415205, Blast_Score=86, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17506311, Length=187, Percent_Identity=41.1764705882353, Blast_Score=135, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17532641, Length=193, Percent_Identity=36.2694300518135, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17539496, Length=190, Percent_Identity=36.3157894736842, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71980590, Length=173, Percent_Identity=36.4161849710983, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71980594, Length=173, Percent_Identity=36.4161849710983, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17506307, Length=177, Percent_Identity=40.1129943502825, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71997782, Length=175, Percent_Identity=34.2857142857143, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17552780, Length=178, Percent_Identity=37.0786516853933, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI32563659, Length=187, Percent_Identity=31.5508021390374, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17565860, Length=215, Percent_Identity=35.3488372093023, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17532643, Length=183, Percent_Identity=35.5191256830601, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17539498, Length=158, Percent_Identity=35.4430379746835, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17566266, Length=165, Percent_Identity=35.1515151515151, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17551282, Length=184, Percent_Identity=34.2391304347826, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17551284, Length=184, Percent_Identity=34.2391304347826, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17559074, Length=191, Percent_Identity=31.9371727748691, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17552782, Length=165, Percent_Identity=34.5454545454545, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17552784, Length=191, Percent_Identity=30.3664921465969, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321848, Length=177, Percent_Identity=36.7231638418079, Blast_Score=96, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6320359, Length=159, Percent_Identity=40.251572327044, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320510, Length=209, Percent_Identity=33.9712918660287, Blast_Score=87, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323246, Length=194, Percent_Identity=35.5670103092784, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6323562, Length=211, Percent_Identity=34.1232227488152, Blast_Score=85, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322492, Length=208, Percent_Identity=29.3269230769231, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI19922376, Length=189, Percent_Identity=36.5079365079365, Blast_Score=134, Evalue=8e-32, Organism=Drosophila melanogaster, GI17986117, Length=186, Percent_Identity=38.1720430107527, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI19922912, Length=185, Percent_Identity=44.8648648648649, Blast_Score=118, Evalue=4e-27, Organism=Drosophila melanogaster, GI24652460, Length=185, Percent_Identity=33.5135135135135, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI21357249, Length=112, Percent_Identity=42.8571428571429, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI20130249, Length=206, Percent_Identity=35.4368932038835, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI21355677, Length=190, Percent_Identity=34.2105263157895, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24586038, Length=187, Percent_Identity=34.2245989304813, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24664125, Length=175, Percent_Identity=36, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI21357783, Length=175, Percent_Identity=36, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI45549139, Length=175, Percent_Identity=36.5714285714286, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI24650807, Length=185, Percent_Identity=35.6756756756757, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI17647301, Length=182, Percent_Identity=34.6153846153846, Blast_Score=81, Evalue=7e-16,
Paralogues:
None
Copy number: 780 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015891 - InterPro: IPR002130 [H]
Pfam domain/function: PF00160 Pro_isomerase [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 29342; Mature: 29342
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS50072 CSA_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLSLSLVAISLLNLSACESVDRAIKGDKYIDEKTAKEESEAASKAYEESIQKALKAD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASQFPQLTKEVGKEEAKVVMRTSQGDITLKLFPKYAPLAVENFLTHAKKGYYDNLTFHRV HHHHHHHHHHHCHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHH INDFMIQSGDPKGDGTGGESIWKGKDPKKDAGNGFVNEISPFLYHIRGALAMANAGANTN HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC GSQFYINQNKKNQSKGLSSTNYPKPIISAYEHGGNPSLDGGYTVFGQVIDGMDVVDKIAA CCEEEEECCCCCHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TSINQNDKPEQDITITSIDIVKDYRFKN HCCCCCCCCCCCEEEEEEHHHHHCCCCC >Mature Secondary Structure MKKLLSLSLVAISLLNLSACESVDRAIKGDKYIDEKTAKEESEAASKAYEESIQKALKAD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASQFPQLTKEVGKEEAKVVMRTSQGDITLKLFPKYAPLAVENFLTHAKKGYYDNLTFHRV HHHHHHHHHHHCHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHH INDFMIQSGDPKGDGTGGESIWKGKDPKKDAGNGFVNEISPFLYHIRGALAMANAGANTN HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC GSQFYINQNKKNQSKGLSSTNYPKPIISAYEHGGNPSLDGGYTVFGQVIDGMDVVDKIAA CCEEEEECCCCCHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TSINQNDKPEQDITITSIDIVKDYRFKN HCCCCCCCCCCCEEEEEEHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA