Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is rofA
Identifier: 15674341
GI number: 15674341
Start: 115038
End: 116531
Strand: Reverse
Name: rofA
Synonym: SPy_0124
Alternate gene names: NA
Gene position: 116531-115038 (Counterclockwise)
Preceding gene: 15674346
Following gene: 15674340
Centisome position: 6.29
GC content: 34.07
Gene sequence:
>1494_bases TTGATAGAAAAATACTTGGAATCATCAATCGAATCAAAATGTCAGTTAATTGTCTTGTTTTTTAAGACATCTTATTTGCC AATAACTGAGGTAGCAGAAAAAACTGGCTTAACCTTTTTACAACTAAACCATTATTGTGAGGAACTGAATGCCTTTTTCC CTGGTAGTCTGTCTATGACCATCCAAAAAAGGATGATATCTTGCCAATTTACACATCCTTTTAAAGAAACTTATCTTTAC CAACTCTATGCATCATCTAATGTCTTACAATTACTAGCCTTTTTAATAAAAAATGGTTCCCACTCTCGTCCCCTTACGGA TTTTGCAAGAAGTCATTTTTTATCAAACTCCTCAGCTTATCGGATGCGCGAAGCATTGATTCCTTTATTAAGAAACTTTG AATTAAAACTCTCTAAGAACAAGATTGTCGGTGAGGAATATCGCATCCGTTACCTCATCGCTCTGCTATATAGTAAGTTT GGCATTAAAGTTTATGACTTGACGCAGCAAGACAAAAACACTATTCATAGCTTTTTATCCCATAGTTCCACCCACCTTAA AACCTCTCCTTGGTTATCGGAATCGTTTTCTTTCTATGACATTTTATTAGCTTTATCGTGGAAGCGGCATCAATTTTCGG TAACTATTCCCCAAACCAGAATTTTTCAACAATTAAAAAAACTTTTTGTCTACGATTCTTTGAAAAAAAGTAGCCATGAT ATTATCGAAACTTACTGCCAACTAAACTTTTCAGCAGGAGATTTGGACTACCTCTATTTAATTTATATCACCGCTAATAA TTCTTTTGCGAGCTTACAATGGACACCTGAGCATATCAGACAATATTGTCAACTTTTTGAAGAAAATGATACTTTTCGCC TGCTTTTAAATCCTATCATCACTCTTTTACCTAACCTAAAAGAGCAAAAGGCTAGTTTAGTAAAAGCTCTTATGTTTTTT TCAAAATCATTCTTGTTTAATCTGCAACATTTTATTCCTGAGACCAACTTATTCGTTTCTCCGTACTATAAAGGAAACCA AAAACTCTATACGTCCTTAAAGTTAATTGTCGAAGAGTGGATGGCCAAACTTCCTGGTAAGCGTGACTTGAACCATAAGC ATTTTCATCTTTTTTGCCACTATGTCGAGCAAAGTCTAAGAAATATCCAACCTCCTTTAGTTGTTGTTTTCGTAGCCAGT AATTTTATCAATGCTCATCTCCTAACGGATTCTTTTCCAAGGTATTTCTCGGATAAAAGCATTGATTTTCATTCCTATTA TCTATTGCAAGATAATGTTTATCAAATTCCTGATTTAAAGCCAGATTTGGTCATCACTCACAGTCAACTGATTCCTTTTG TTCACCATGAACTTACAAAAGGAATTGCTGTTGCTGAAATATCTTTTGATGAATCGATTCTGTCTATCCAAGAATTGATG TATCAAGTTAAAGAGGAAAAATTCCAAGCTGATTTAACCAAGCAATTAACATAA
Upstream 100 bases:
>100_bases ATTTGACTTCTATTTTTAGCTTAGATAGAATTGAAATAGGAGAATACACTTATCAAAGACTTATTTGGCTTTCTAAGTGT AGGAAGAGAGGTCCCTTTCC
Downstream 100 bases:
>100_bases GCGCCATGTCACCACATTGCGCGACTTTAGACCACACCTTAACTTAATCCCGAGTCATTCTCTGGGATTTTTTACTGTCT ATCTGTATTGATTTTTCAAG
Product: regulatory protein
Products: NA
Alternate protein names: Regulatory Protein-RofA ; Regulatory Protein; RofA Family Transcriptional Regulator; Regulatory Protein RofA ; Transcriptional Regulator RofA Familiy; RofA Regulatory Protein; RofA/Nra-Like Transcriptional Regulator
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMTIQKRMISCQFTHPFKETYLY QLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAYRMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKF GIKVYDLTQQDKNTIHSFLSHSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSHD IIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQYCQLFEENDTFRLLLNPIITLLPNLKEQKASLVKALMFF SKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEWMAKLPGKRDLNHKHFHLFCHYVEQSLRNIQPPLVVVFVAS NFINAHLLTDSFPRYFSDKSIDFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELM YQVKEEKFQADLTKQLT
Sequences:
>Translated_497_residues MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMTIQKRMISCQFTHPFKETYLY QLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAYRMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKF GIKVYDLTQQDKNTIHSFLSHSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSHD IIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQYCQLFEENDTFRLLLNPIITLLPNLKEQKASLVKALMFF SKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEWMAKLPGKRDLNHKHFHLFCHYVEQSLRNIQPPLVVVFVAS NFINAHLLTDSFPRYFSDKSIDFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELM YQVKEEKFQADLTKQLT >Mature_497_residues MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMTIQKRMISCQFTHPFKETYLY QLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAYRMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKF GIKVYDLTQQDKNTIHSFLSHSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSHD IIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQYCQLFEENDTFRLLLNPIITLLPNLKEQKASLVKALMFF SKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEWMAKLPGKRDLNHKHFHLFCHYVEQSLRNIQPPLVVVFVAS NFINAHLLTDSFPRYFSDKSIDFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELM YQVKEEKFQADLTKQLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58335; Mature: 58335
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMT CCHHHHHHHHHCHHEEEEEEEECCCCCHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHH IQKRMISCQFTHPFKETYLYQLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAY HHHHHHEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHH RMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKFGIKVYDLTQQDKNTIHSFLS HHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHC HSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSHD CCCCCCCCCCCHHHCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHH IIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQYCQLFEENDTFRLLLNPII HHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHH TLLPNLKEQKASLVKALMFFSKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEW HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH MAKLPGKRDLNHKHFHLFCHYVEQSLRNIQPPLVVVFVASNFINAHLLTDSFPRYFSDKS HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHEEEEECCCCCHHCCCCC IDFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELM CCEEEEEEEECCEEECCCCCCCEEEEHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHH YQVKEEKFQADLTKQLT HHHHHHHHHHHHHHCCC >Mature Secondary Structure MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMT CCHHHHHHHHHCHHEEEEEEEECCCCCHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHH IQKRMISCQFTHPFKETYLYQLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAY HHHHHHEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHH RMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKFGIKVYDLTQQDKNTIHSFLS HHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHC HSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSHD CCCCCCCCCCCHHHCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHH IIETYCQLNFSAGDLDYLYLIYITANNSFASLQWTPEHIRQYCQLFEENDTFRLLLNPII HHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHH TLLPNLKEQKASLVKALMFFSKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEW HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH MAKLPGKRDLNHKHFHLFCHYVEQSLRNIQPPLVVVFVASNFINAHLLTDSFPRYFSDKS HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHEEEEECCCCCHHCCCCC IDFHSYYLLQDNVYQIPDLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELM CCEEEEEEEECCEEECCCCCCCEEEEHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHH YQVKEEKFQADLTKQLT HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA