Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is pepA [H]
Identifier: 15674335
GI number: 15674335
Start: 108813
End: 109880
Strand: Reverse
Name: pepA [H]
Synonym: SPy_0115
Alternate gene names: 15674335
Gene position: 109880-108813 (Counterclockwise)
Preceding gene: 15674336
Following gene: 15674334
Centisome position: 5.93
GC content: 45.22
Gene sequence:
>1068_bases ATGACAGACTTATTCTCAAAAATCAAAGAAGTTACCGAACTGGATGGCATTGCGGGCTATGAACATAGCGTTCGTGACTA CCTACGCACCAAAATAACCCCGCTGGTTGACCGTGTTGAAACAGACGGGCTTGGTGGCATTTTTGGTATCAGAGATAGTA AAGCTGAAAAAGCCCCCCGTATTTTAGTAGCTGCGCACATGGACGAAGTCGGTTTTATGGTCAGTGATATCAAAGTTGAC GGAACGCTACGCGTGGTTGGTATCGGTGGTTGGAACCCACTTGTTGTCAGTTCACAACGGTTTACCCTTTACACACGCAC TGGCCAAGTTATTCCCCTTATTTCAGGATCGGTACCTCCCCATTTTTTACGTGGGGCAAATGGCTCTGCTAGTCTACCAC ATATCGAAGATATTGTGTTTGATGGTGGCTTTACGGATAAGGCAGAAGCTGAAAGATTTGGTATTACACCGGGTGATATT ATTATCCCTCAATCTGAAACGATCCTAACAGCCAATCAAAAAAATATTATTTCAAAAGCTTGGGACAATCGCTATGGCGT TCTCATGATAACAGAAATGCTTGAAGCGTTAAAAGGACAAGACCTTAACAACACCCTAATTGCAGGTGCTAACGTTCAAG AAGAAGTTGGTCTGCGCGGAGCCCACGTCTCAACCACCAAGTTCGACCCTGAACTCTTTTTCGCAGTAGATTGTTCGCCT GCTGGTGATATTTATGGCAATCCTGGAACAATCGGAGATGGTACCTTGTTGCGTTTCTACGACCCAGGCCATGTCATGCT CAAAGATATGCGCGACTTCTTACTGACTACTGCTGAGGAAGCTGGTGTCAATTTCCAATACTATTGTGGCAAGGGAGGCA CAGATGCAGGTGCTGCACACCTTCAAAATGGTGGTGTCCCATCAACAACCATCGGAGTCTGTGCACGCTACATTCACTCT CATCAAACCCTCTACGCTATGGATGATTTCGTAGAAGCCCAAGCCTTCTTACAAGCCATTATCAAAAAACTGGATCGCTC AACCGTTGACTTGATTAAATGTTACTAA
Upstream 100 bases:
>100_bases TTTTTCTTTTCTGTGAAACCCATTCTTACTTAAAAAGTGGTAGAATATAAGGAGATGACCGCGTTGAACTGGTCTGAAAC CTTTTAAATGGAGATGAAAA
Downstream 100 bases:
>100_bases ACTAGCATTAGCCTGATTAACCATAATATCCCACAAGGAGCAACAGAATGAAAATTGGCATTATTGGTGTTGGCAAAATG GCTAGCGCTATCATCAAAGG
Product: putative glutamyl-aminopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTDLFSKIKEVTELDGIAGYEHSVRDYLRTKITPLVDRVETDGLGGIFGIRDSKAEKAPRILVAAHMDEVGFMVSDIKVD GTLRVVGIGGWNPLVVSSQRFTLYTRTGQVIPLISGSVPPHFLRGANGSASLPHIEDIVFDGGFTDKAEAERFGITPGDI IIPQSETILTANQKNIISKAWDNRYGVLMITEMLEALKGQDLNNTLIAGANVQEEVGLRGAHVSTTKFDPELFFAVDCSP AGDIYGNPGTIGDGTLLRFYDPGHVMLKDMRDFLLTTAEEAGVNFQYYCGKGGTDAGAAHLQNGGVPSTTIGVCARYIHS HQTLYAMDDFVEAQAFLQAIIKKLDRSTVDLIKCY
Sequences:
>Translated_355_residues MTDLFSKIKEVTELDGIAGYEHSVRDYLRTKITPLVDRVETDGLGGIFGIRDSKAEKAPRILVAAHMDEVGFMVSDIKVD GTLRVVGIGGWNPLVVSSQRFTLYTRTGQVIPLISGSVPPHFLRGANGSASLPHIEDIVFDGGFTDKAEAERFGITPGDI IIPQSETILTANQKNIISKAWDNRYGVLMITEMLEALKGQDLNNTLIAGANVQEEVGLRGAHVSTTKFDPELFFAVDCSP AGDIYGNPGTIGDGTLLRFYDPGHVMLKDMRDFLLTTAEEAGVNFQYYCGKGGTDAGAAHLQNGGVPSTTIGVCARYIHS HQTLYAMDDFVEAQAFLQAIIKKLDRSTVDLIKCY >Mature_354_residues TDLFSKIKEVTELDGIAGYEHSVRDYLRTKITPLVDRVETDGLGGIFGIRDSKAEKAPRILVAAHMDEVGFMVSDIKVDG TLRVVGIGGWNPLVVSSQRFTLYTRTGQVIPLISGSVPPHFLRGANGSASLPHIEDIVFDGGFTDKAEAERFGITPGDII IPQSETILTANQKNIISKAWDNRYGVLMITEMLEALKGQDLNNTLIAGANVQEEVGLRGAHVSTTKFDPELFFAVDCSPA GDIYGNPGTIGDGTLLRFYDPGHVMLKDMRDFLLTTAEEAGVNFQYYCGKGGTDAGAAHLQNGGVPSTTIGVCARYIHSH QTLYAMDDFVEAQAFLQAIIKKLDRSTVDLIKCY
Specific function: Unknown
COG id: COG1363
COG function: function code G; Cellulase M and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M42 family [H]
Homologues:
Organism=Escherichia coli, GI1790332, Length=349, Percent_Identity=30.0859598853868, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1788727, Length=351, Percent_Identity=30.7692307692308, Blast_Score=141, Evalue=7e-35, Organism=Escherichia coli, GI87082417, Length=354, Percent_Identity=27.683615819209, Blast_Score=111, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017538 - InterPro: IPR008007 [H]
Pfam domain/function: PF05343 Peptidase_M42 [H]
EC number: =3.4.11.7 [H]
Molecular weight: Translated: 38579; Mature: 38448
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLFSKIKEVTELDGIAGYEHSVRDYLRTKITPLVDRVETDGLGGIFGIRDSKAEKAPR CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCE ILVAAHMDEVGFMVSDIKVDGTLRVVGIGGWNPLVVSSQRFTLYTRTGQVIPLISGSVPP EEEEECCCHHCEEEEEEEECCEEEEEEECCCCCEEEECCEEEEEEECCCEEEEECCCCCH HFLRGANGSASLPHIEDIVFDGGFTDKAEAERFGITPGDIIIPQSETILTANQKNIISKA HHHCCCCCCCCCCCHHHEEECCCCCCCCCHHHCCCCCCCEEECCCCEEEECCHHHHHHHH WDNRYGVLMITEMLEALKGQDLNNTLIAGANVQEEVGLRGAHVSTTKFDPELFFAVDCSP HCCCCCEEEHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCCEEECCCCCCEEEEEEECCC AGDIYGNPGTIGDGTLLRFYDPGHVMLKDMRDFLLTTAEEAGVNFQYYCGKGGTDAGAAH CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH LQNGGVPSTTIGVCARYIHSHQTLYAMDDFVEAQAFLQAIIKKLDRSTVDLIKCY HCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHEECC >Mature Secondary Structure TDLFSKIKEVTELDGIAGYEHSVRDYLRTKITPLVDRVETDGLGGIFGIRDSKAEKAPR CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCE ILVAAHMDEVGFMVSDIKVDGTLRVVGIGGWNPLVVSSQRFTLYTRTGQVIPLISGSVPP EEEEECCCHHCEEEEEEEECCEEEEEEECCCCCEEEECCEEEEEEECCCEEEEECCCCCH HFLRGANGSASLPHIEDIVFDGGFTDKAEAERFGITPGDIIIPQSETILTANQKNIISKA HHHCCCCCCCCCCCHHHEEECCCCCCCCCHHHCCCCCCCEEECCCCEEEECCHHHHHHHH WDNRYGVLMITEMLEALKGQDLNNTLIAGANVQEEVGLRGAHVSTTKFDPELFFAVDCSP HCCCCCEEEHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCCEEECCCCCCEEEEEEECCC AGDIYGNPGTIGDGTLLRFYDPGHVMLKDMRDFLLTTAEEAGVNFQYYCGKGGTDAGAAH CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH LQNGGVPSTTIGVCARYIHSHQTLYAMDDFVEAQAFLQAIIKKLDRSTVDLIKCY HCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8535515 [H]