Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is secY [H]
Identifier: 15674307
GI number: 15674307
Start: 73724
End: 75028
Strand: Direct
Name: secY [H]
Synonym: SPy_0073
Alternate gene names: 15674307
Gene position: 73724-75028 (Clockwise)
Preceding gene: 15674306
Following gene: 15674308
Centisome position: 3.98
GC content: 36.4
Gene sequence:
>1305_bases ATGTTCTTAAAAATACTAAAAGACGCGTTAAAGATAAAGACTGTACGGAATAAAATTTTCTTTACTATATTTATCATTCT TGTATTCCGAATTGGGACACATATTACCGTACCTGGTGTAAATGCCAAGAGCTTAGAGCAATTAAGTGAACTCCCTTTCT TAAATATGTTAAACTTAGTTAGTGGTAATGCGATGAGAAATTTCTCAGTATTTTCAATGGGGGTTAGCCCATATATTACT GCTTCTATCGTTGTTCAGTTATTGCAGATGGATATTTTACCTAAGTTTGTTGAGTGGGGCAAACAAGGTGAGGTTGGACG TCGTAAATTAAATCAAGCGACGCGCTATATTTCACTTGTTTTGGCTTTTGCCCAATCCATTGGTATCACTGCAGGGTTTA ATACTTTGTCGAACGTTGCACTTGTTAAGACACCAGACATCAAAACATATTTACTGATCGGGGCATTACTGACAACAGGT AGCGTTATTGTTACCTGGCTTGGAGAACAAATCACAGATAAAGGATTTGGTAATGGCGTATCAATGATTATCTTTGCGGG TATTATTTCGTCTATTCCAAGTGCAATTGCAACAATTCGTGAAGACTATTTTGTAAATGTTAAGGCAAGTGATTTACACT CGTCTTATCTCATTGTTGGGATTTTAATCATAGCTGTTCTTGCTATTGTTTTCTTTACAACATATGTCCAACAAGCGGAA TATAAAATTCCAATCCAATACACAAAGCTAATGCAAGGTGCACCTACAAGTTCATATCTTCCATTAAAAGTAAATCCAGC CGGCGTTATTCCCGTTATCTTTGCTAGCTCGATTACAACTATCCCAAGTACGATTATTCCTTTTGTTCAAAATGGTAGAG ATTTACCGTGGTTAAACCGTTTGCAAGAAATTTTTAATTATCAAACTCCAGTCGGAATGATAGTTTACGCCTTGTTGATT ATATTGTTCTCATTCTTCTATACCTTTGTACAAGTTAATCCTGAGAAGACAGCAGAAAATCTTCAGAAGAATTCCTCATA TATACCAAGTGTTCGCCCTGGACGTGAGACAGAACAATTTATGTCCGCATTGCTAAAAAAACTAGCAACCGTAGGAGCTA TCTTCTTAGCATTTATCTCTTTAGCGCCAATAGCAGCACAACAAGCTCTCAACCTTTCTTCTAGTATTGCTTTAGGTGGA ACTAGTTTGCTCATTTTGATTTCAACTGGTATCGAAGGTATGAAACAGCTTGAGGGATATCTTCTAAAGAGAAAATATGT CGGATTTATGAATACAGCAGAATAG
Upstream 100 bases:
>100_bases AAATTGACTGTAAAAGCAGCTAAGTTCTCAAAATCTGCTGAAGCAGCTATTATTGCTAAAGGTGGTTCAATCGAAGTCAT CTAATGAGGGGATACTCATT
Downstream 100 bases:
>100_bases AATACAGGTTGACATTGTCAACCTTCTATTTTGTTTTTAAATGACAATAAGACTTGGTTATCATCAAACGATTTCTTGTT GCCATTTGAAAACAAAAACC
Product: preprotein translocase subunit SecY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MFLKILKDALKIKTVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGNAMRNFSVFSMGVSPYIT ASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQSIGITAGFNTLSNVALVKTPDIKTYLLIGALLTTG SVIVTWLGEQITDKGFGNGVSMIIFAGIISSIPSAIATIREDYFVNVKASDLHSSYLIVGILIIAVLAIVFFTTYVQQAE YKIPIQYTKLMQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDLPWLNRLQEIFNYQTPVGMIVYALLI ILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEQFMSALLKKLATVGAIFLAFISLAPIAAQQALNLSSSIALGG TSLLILISTGIEGMKQLEGYLLKRKYVGFMNTAE
Sequences:
>Translated_434_residues MFLKILKDALKIKTVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGNAMRNFSVFSMGVSPYIT ASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQSIGITAGFNTLSNVALVKTPDIKTYLLIGALLTTG SVIVTWLGEQITDKGFGNGVSMIIFAGIISSIPSAIATIREDYFVNVKASDLHSSYLIVGILIIAVLAIVFFTTYVQQAE YKIPIQYTKLMQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDLPWLNRLQEIFNYQTPVGMIVYALLI ILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEQFMSALLKKLATVGAIFLAFISLAPIAAQQALNLSSSIALGG TSLLILISTGIEGMKQLEGYLLKRKYVGFMNTAE >Mature_434_residues MFLKILKDALKIKTVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLVSGNAMRNFSVFSMGVSPYIT ASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLVLAFAQSIGITAGFNTLSNVALVKTPDIKTYLLIGALLTTG SVIVTWLGEQITDKGFGNGVSMIIFAGIISSIPSAIATIREDYFVNVKASDLHSSYLIVGILIIAVLAIVFFTTYVQQAE YKIPIQYTKLMQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDLPWLNRLQEIFNYQTPVGMIVYALLI ILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEQFMSALLKKLATVGAIFLAFISLAPIAAQQALNLSSSIALGG TSLLILISTGIEGMKQLEGYLLKRKYVGFMNTAE
Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]
COG id: COG0201
COG function: function code U; Preprotein translocase subunit SecY
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secY/SEC61-alpha family [H]
Homologues:
Organism=Escherichia coli, GI1789696, Length=420, Percent_Identity=39.0476190476191, Blast_Score=257, Evalue=1e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002208 - InterPro: IPR023201 [H]
Pfam domain/function: PF00344 SecY [H]
EC number: NA
Molecular weight: Translated: 47693; Mature: 47693
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS00755 SECY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKILKDALKIKTVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCHHHHHHHH SGNAMRNFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLV CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LAFAQSIGITAGFNTLSNVALVKTPDIKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGV HHHHHHHCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH SMIIFAGIISSIPSAIATIREDYFVNVKASDLHSSYLIVGILIIAVLAIVFFTTYVQQAE HHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YKIPIQYTKLMQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDLPWLNR CCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LQEIFNYQTPVGMIVYALLIILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEQF HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHH MSALLKKLATVGAIFLAFISLAPIAAQQALNLSSSIALGGTSLLILISTGIEGMKQLEGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEHHCHHHHHHHHHH LLKRKYVGFMNTAE HHHHHHHCCCCCCC >Mature Secondary Structure MFLKILKDALKIKTVRNKIFFTIFIILVFRIGTHITVPGVNAKSLEQLSELPFLNMLNLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCHHHHHHHH SGNAMRNFSVFSMGVSPYITASIVVQLLQMDILPKFVEWGKQGEVGRRKLNQATRYISLV CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LAFAQSIGITAGFNTLSNVALVKTPDIKTYLLIGALLTTGSVIVTWLGEQITDKGFGNGV HHHHHHHCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH SMIIFAGIISSIPSAIATIREDYFVNVKASDLHSSYLIVGILIIAVLAIVFFTTYVQQAE HHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YKIPIQYTKLMQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTIIPFVQNGRDLPWLNR CCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LQEIFNYQTPVGMIVYALLIILFSFFYTFVQVNPEKTAENLQKNSSYIPSVRPGRETEQF HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHH MSALLKKLATVGAIFLAFISLAPIAAQQALNLSSSIALGGTSLLILISTGIEGMKQLEGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEHHCHHHHHHHHHH LLKRKYVGFMNTAE HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]