Click here to switch to the map view.

The map label for this gene is 13474960

Identifier: 13474960

GI number: 13474960

Start: 4872357

End: 4872695

Strand: Direct

Name: 13474960

Synonym: mlr6028

Alternate gene names: NA

Gene position: 4872357-4872695 (Clockwise)

Preceding gene: 13475034

Following gene: 13474957

Centisome position: 69.25

GC content: 54.57

Gene sequence:

>339_bases
ATGATTGAGACGCTGGAAAGCAATCACCCGTCGGCTTACAGTCTGACTATGCCGTTTGCCCGCAAATTAATTCTTCACGT
TCCGGTATCGGATGAGACCTTGCTCGATGGCTTTGTTGAGCAATGTCTGAATGACGGTGTATCGCTCGTGGCCGTGGTCG
GACCAGGCTGCGCGAGGGTTGAAGACATTATCGACGAGATCGTCGTCGGTGACGGAAGCGACGAGACACGCTTTATATCC
ACGACTTCTCACCCCGATGAGCCATTTGAGGATGTGTTGAACATGGCTAGGGCGTGGGAGTTCGAGCGCGGCGATCCCGT
CGAAGAGGTCCGGCTGTAA

Upstream 100 bases:

>100_bases
TCTTGTGGTCGCAGCCGCGCTATCAACCGCAGCTATAGCGTTTGCGTGTCGCGATGTTCCCACCTTAATTTAGACTAGGT
CGTGAACTCATAAACGCTGG

Downstream 100 bases:

>100_bases
GAGTCGTTGACCGCCCGCAATTTAGGCTTCCATACCACGCCGTTTTCTGATTCAGGCTCCACATGAGCCGATATGACCTG
ACTGACTTCGAATGGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MIETLESNHPSAYSLTMPFARKLILHVPVSDETLLDGFVEQCLNDGVSLVAVVGPGCARVEDIIDEIVVGDGSDETRFIS
TTSHPDEPFEDVLNMARAWEFERGDPVEEVRL

Sequences:

>Translated_112_residues
MIETLESNHPSAYSLTMPFARKLILHVPVSDETLLDGFVEQCLNDGVSLVAVVGPGCARVEDIIDEIVVGDGSDETRFIS
TTSHPDEPFEDVLNMARAWEFERGDPVEEVRL
>Mature_112_residues
MIETLESNHPSAYSLTMPFARKLILHVPVSDETLLDGFVEQCLNDGVSLVAVVGPGCARVEDIIDEIVVGDGSDETRFIS
TTSHPDEPFEDVLNMARAWEFERGDPVEEVRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12388; Mature: 12388

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETLESNHPSAYSLTMPFARKLILHVPVSDETLLDGFVEQCLNDGVSLVAVVGPGCARV
CCCCCCCCCCCEEEEEHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHH
EDIIDEIVVGDGSDETRFISTTSHPDEPFEDVLNMARAWEFERGDPVEEVRL
HHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure
MIETLESNHPSAYSLTMPFARKLILHVPVSDETLLDGFVEQCLNDGVSLVAVVGPGCARV
CCCCCCCCCCCEEEEEHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHH
EDIIDEIVVGDGSDETRFISTTSHPDEPFEDVLNMARAWEFERGDPVEEVRL
HHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA