| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13474786
Identifier: 13474786
GI number: 13474786
Start: 4632895
End: 4633494
Strand: Direct
Name: 13474786
Synonym: mlr5752
Alternate gene names: NA
Gene position: 4632895-4633494 (Clockwise)
Preceding gene: 13474785
Following gene: 13474788
Centisome position: 65.84
GC content: 57.67
Gene sequence:
>600_bases GTGCCCAAGCACCCACCAAGCTGCAAACGCTCAGCCGGCCAAAGCCATTCCAATACCAACGCCAAGGCCTATAGCAAGGC CCATGAGCTTCCCGGCAAAGTCTACTGCAACGGCGCGGAGAGTCGTCCAGGCGTCCACACGGGGCGCTCTGAGCGCAGCG TTGAGATCATCGAAGATCGTATCCATGGGCGGATTCTAGATCGAAACCCGGAATCTGTGAATCCCCTGTCTCGGCGGCAT TGGAACCGAATCAGGGGCTTGCGGCTTGTTAGCTTTCAACGAAGCTTGCATGAGGCGCGCCTAATAGGATTGGAGCTGAG GCCCCGGCGCTGGGGTGACATACGCCGGGGCCTTTGTGGGCATGTACGTACTACCCATCATGTCGAGTATTATCGTGGGC TAATATGGTCAACAAACCATGAAGGACCACAGCCGATGACCGACGAGATGGAAACGACCTACGTCGTGAGCGTCTACGAG GCGCCGAATTGGCGCACAGTGCTAACGACCAACGATAAGGCCAAAGCTCTCGCCTGGGCGAGAGAGATCGGCGACAACGT GCGCGTCGAGGAGATCACTCCGAAGCCGATTAAGCGCTAA
Upstream 100 bases:
>100_bases TTAACCCCAACCCGTGCAACTGCACCGGCCAAAAGCGGGCCATGAGAACTCGCTCCGAGCGTATTCTACCGTATATTAGC ATTGTCGCAAGTGAGACTGA
Downstream 100 bases:
>100_bases AGCGCTCGGCGAAGTCGGCGACATATCCTGTGATAGATCGGCGAGCTTTGCAGGTCTCGGGCTGCGTGCGTAAACAGCAA CACGACAAAGAGAACTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MPKHPPSCKRSAGQSHSNTNAKAYSKAHELPGKVYCNGAESRPGVHTGRSERSVEIIEDRIHGRILDRNPESVNPLSRRH WNRIRGLRLVSFQRSLHEARLIGLELRPRRWGDIRRGLCGHVRTTHHVEYYRGLIWSTNHEGPQPMTDEMETTYVVSVYE APNWRTVLTTNDKAKALAWAREIGDNVRVEEITPKPIKR
Sequences:
>Translated_199_residues MPKHPPSCKRSAGQSHSNTNAKAYSKAHELPGKVYCNGAESRPGVHTGRSERSVEIIEDRIHGRILDRNPESVNPLSRRH WNRIRGLRLVSFQRSLHEARLIGLELRPRRWGDIRRGLCGHVRTTHHVEYYRGLIWSTNHEGPQPMTDEMETTYVVSVYE APNWRTVLTTNDKAKALAWAREIGDNVRVEEITPKPIKR >Mature_198_residues PKHPPSCKRSAGQSHSNTNAKAYSKAHELPGKVYCNGAESRPGVHTGRSERSVEIIEDRIHGRILDRNPESVNPLSRRHW NRIRGLRLVSFQRSLHEARLIGLELRPRRWGDIRRGLCGHVRTTHHVEYYRGLIWSTNHEGPQPMTDEMETTYVVSVYEA PNWRTVLTTNDKAKALAWAREIGDNVRVEEITPKPIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22907; Mature: 22776
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKHPPSCKRSAGQSHSNTNAKAYSKAHELPGKVYCNGAESRPGVHTGRSERSVEIIEDR CCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHH IHGRILDRNPESVNPLSRRHWNRIRGLRLVSFQRSLHEARLIGLELRPRRWGDIRRGLCG HCCEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHC HVRTTHHVEYYRGLIWSTNHEGPQPMTDEMETTYVVSVYEAPNWRTVLTTNDKAKALAWA CCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHHH REIGDNVRVEEITPKPIKR HHHCCCCEEEECCCCCCCC >Mature Secondary Structure PKHPPSCKRSAGQSHSNTNAKAYSKAHELPGKVYCNGAESRPGVHTGRSERSVEIIEDR CCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHH IHGRILDRNPESVNPLSRRHWNRIRGLRLVSFQRSLHEARLIGLELRPRRWGDIRRGLCG HCCEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHC HVRTTHHVEYYRGLIWSTNHEGPQPMTDEMETTYVVSVYEAPNWRTVLTTNDKAKALAWA CCCCHHHHHHHHCEEECCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHHH REIGDNVRVEEITPKPIKR HHHCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA