| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474770
Identifier: 13474770
GI number: 13474770
Start: 4616080
End: 4616709
Strand: Direct
Name: 13474770
Synonym: msr8675
Alternate gene names: NA
Gene position: 4616080-4616709 (Clockwise)
Preceding gene: 13474769
Following gene: 13474771
Centisome position: 65.61
GC content: 57.62
Gene sequence:
>630_bases GTGGGCAAGAGAGTGCTCTTTAGACGCCGAAATCCTGATGGTCTCTTCGAACGATTGCGCATTTATATGTGGCCGCGCCG CTCCTTCTCGCGATCGTTTCAGTATGTTTCAAAGCGTATCCTCCGGCTGAACGCCACTCCAACGGCCGTCGCGGCGGGGG TGGCGGCTGGGGTTTTCGCGTCTTTCTTTCCACTAGGGTCCCATTTCGCCATTGCCGCCATCGTGTGCTGGCTGATTTCA GGAAACATGGTGGCGGCAGGGCTAGGAACATTTGTCTTTGGCAATCCGCTGACCCTCCCGTTTGTTGTGGGAGCGACTTG GGAGACCGGCAAGATTATGTTGCATGGCCACATGCAAAGTGACGAACGGCCGGCCCATCTGAGTGAGATGTTGCAGACCC TTTCAATTTCGCAACTGTGGGCACCGGTCTTAAAGCCCATGCTGTGCGGTGCGGTGCCACTCGGGCTGGTTTTTGGCCTG TTGTTCTATGGCATCACCCGCTGTGGCATGACAGCCTTCCGCGAAAAGAGGCGCAAGCGACTGGCCGAAAAGGGGAGCCT GCTCCAGCAGCAGGAAGACATCGTGTTATCACCCCCTCTGCCCACTCGACATCGCCGTGCTGGAGGGTGA
Upstream 100 bases:
>100_bases CGCTTTCGGACAACCGGTTGATCAGCATATTCGGAACAAAGCAGCACAGGCTGCGTTTTTTCAGAGACGAGGTCCATCCG TTCAACCGACCGCGTTTGAA
Downstream 100 bases:
>100_bases ATCGCGGCAGGGCCGCTGTAGAAATGCGTCCGCTCGTCGGAAATATCGCCGCTATAAGCGCTTCCCTACAATTGGCGGCC CGGATATCTGGAGCCTCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MGKRVLFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFASFFPLGSHFAIAAIVCWLIS GNMVAAGLGTFVFGNPLTLPFVVGATWETGKIMLHGHMQSDERPAHLSEMLQTLSISQLWAPVLKPMLCGAVPLGLVFGL LFYGITRCGMTAFREKRRKRLAEKGSLLQQQEDIVLSPPLPTRHRRAGG
Sequences:
>Translated_209_residues MGKRVLFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFASFFPLGSHFAIAAIVCWLIS GNMVAAGLGTFVFGNPLTLPFVVGATWETGKIMLHGHMQSDERPAHLSEMLQTLSISQLWAPVLKPMLCGAVPLGLVFGL LFYGITRCGMTAFREKRRKRLAEKGSLLQQQEDIVLSPPLPTRHRRAGG >Mature_208_residues GKRVLFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFASFFPLGSHFAIAAIVCWLISG NMVAAGLGTFVFGNPLTLPFVVGATWETGKIMLHGHMQSDERPAHLSEMLQTLSISQLWAPVLKPMLCGAVPLGLVFGLL FYGITRCGMTAFREKRRKRLAEKGSLLQQQEDIVLSPPLPTRHRRAGG
Specific function: Unknown
COG id: COG3216
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23227; Mature: 23096
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRVLFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFA CCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SFFPLGSHFAIAAIVCWLISGNMVAAGLGTFVFGNPLTLPFVVGATWETGKIMLHGHMQS HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCC DERPAHLSEMLQTLSISQLWAPVLKPMLCGAVPLGLVFGLLFYGITRCGMTAFREKRRKR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAEKGSLLQQQEDIVLSPPLPTRHRRAGG HHHHHHHHHHCCCEEECCCCCCCCCCCCC >Mature Secondary Structure GKRVLFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFA CCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SFFPLGSHFAIAAIVCWLISGNMVAAGLGTFVFGNPLTLPFVVGATWETGKIMLHGHMQS HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCC DERPAHLSEMLQTLSISQLWAPVLKPMLCGAVPLGLVFGLLFYGITRCGMTAFREKRRKR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAEKGSLLQQQEDIVLSPPLPTRHRRAGG HHHHHHHHHHCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA